基于分子动力学模拟的致病性变异p.L275P对类固醇急性调节蛋白(STAR)结构和功能的新认识

IF 0.7 Q4 MEDICINE, RESEARCH & EXPERIMENTAL
Advanced biomedical research Pub Date : 2025-05-31 eCollection Date: 2025-01-01 DOI:10.4103/abr.abr_439_23
Shahrzad Aghaei, Mohammad Amin Tabatabaiefar, Javad Saffari-Chaleshtori, Erfan Korram, Sara Sadeghi Amini, Maryam Aghaei, Mahbobeh Koohiyan, Zahra Ataie, Payam Samei, Effat Farrokhi
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引用次数: 0

摘要

背景:脂质先天性肾上腺增生症(LCAH)是一种致命形式的类固醇生物合成缺陷,它是由类固醇致生急性调节(STAR)基因突变引起的。有两种不同的临床形式,包括经典和非经典,没有任何可靠的基因型-表型相关性,研究更多的病例可能提供有价值的见解。材料与方法:选取10个伊朗LCAH家族进行遗传连锁分析。在相关家族中对STAR基因进行测序,并使用多种计算机工具和ACMG指南,评估候选变异的致病性。此外,利用分子对接和分子动力学(MD)模拟评估了鉴定的变异对STAR行为的结构影响。结果:数据分析首次在伊朗人群中发现了STAR基因的致病变异C . 824t >C (p.L275P)。此外,分子对接和MD模拟表明,C . 824t >C变异导致总柔韧性和二级结构降低,氢键增加,一些残基的波动发生变化。结论:MD模拟提供了p.L275P介导的STAR构象变化的关键结构和结构见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
New Insight into Pathogenic Variant p.L275P on the Structure and Function of Steroidogenic Acute Regulatory Protein (STAR) Through Molecular Dynamics Simulation.

Background: Lipoid congenital adrenal hyperplasia (LCAH) is the lethal form of steroid biosynthesis defects because of mutations in the steroidogenic acute regulatory (STAR) gene. There are two distinct clinical forms including classical and nonclassical without any reliable genotype-phenotype correlation, and investigation of more cases may provide valuable insights.

Materials and methods: Ten Iranian families affected by LCAH were selected for genetic linkage analysis. The STAR gene was sequenced in the linked families, and using multiple in silico tools and ACMG guidelines, the pathogenicity of candidate variants was assessed. Also, the structural effects of the identified variant on the STAR behavior were evaluated using molecular docking and molecular dynamics (MD) simulation.

Results: Data analysis revealed a pathogenic variant, c.824T>C, (p.L275P), in the STAR gene in the Iranian population for the first time. Furthermore, molecular docking and MD simulation revealed that the c.824T>C variant results in a decrease in total flexibility and secondary structure, an increase in H-bonds and changed fluctuations in some residues.

Conclusions: MD simulation provides the key structural and structural insights of the p.L275P -mediated conformational changes in STAR.

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