{"title":"标题<s:1>基翅目:拟蝇科拟蝇的遗传多样性和种群结构","authors":"Davut Ümit Şirin, Büşra Aslan Kocatürk","doi":"10.1016/j.actatropica.2025.107694","DOIUrl":null,"url":null,"abstract":"<div><div>The family Simuliidae contains many cryptic species within multiple species groups. <em>Prosimulium rachiliense</em> Djafarov, a member of the <em>P. hirtipes</em> species group, is widespread throughout Anatolia. Previous chromosomal research revealed that populations of <em>P. rachiliense</em> in western Anatolia differ cytogenetically from populations in Armenia. We used mitochondrial COI and nuclear ITSI-II sequences to perform phylogenetic analysis and species delimitation tests to reveal the genetic diversity of <em>P. rachiliense</em> in Anatolia and to test the possibility of cryptic lineages. Our results indicated two distinct lineages, one in eastern and one in western Türkiye, with significant genetic diversity in both lineages. Although species delimitation tests with COI dataset suggested multiple candidate species, those with ITS I-II and phylogenetic analyses indicated that <em>P. rachliense</em> is a single species with great genetic diversity. Phylogenetic analysis with COI confirmed that <em>P. rachiliense</em> is a nominal species within the <em>hirtipes</em> species group. Further analyses are needed using genome-wide SNP data with comprehensive sampling to understand deep population structure of <em>P. rachiliense</em> in Türkiye.</div></div>","PeriodicalId":7240,"journal":{"name":"Acta tropica","volume":"268 ","pages":"Article 107694"},"PeriodicalIF":2.1000,"publicationDate":"2025-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic diversity and population structure of Prosimulium rachiliense Djafarov (Diptera: Simuliidae) inTürkiye\",\"authors\":\"Davut Ümit Şirin, Büşra Aslan Kocatürk\",\"doi\":\"10.1016/j.actatropica.2025.107694\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The family Simuliidae contains many cryptic species within multiple species groups. <em>Prosimulium rachiliense</em> Djafarov, a member of the <em>P. hirtipes</em> species group, is widespread throughout Anatolia. Previous chromosomal research revealed that populations of <em>P. rachiliense</em> in western Anatolia differ cytogenetically from populations in Armenia. We used mitochondrial COI and nuclear ITSI-II sequences to perform phylogenetic analysis and species delimitation tests to reveal the genetic diversity of <em>P. rachiliense</em> in Anatolia and to test the possibility of cryptic lineages. Our results indicated two distinct lineages, one in eastern and one in western Türkiye, with significant genetic diversity in both lineages. Although species delimitation tests with COI dataset suggested multiple candidate species, those with ITS I-II and phylogenetic analyses indicated that <em>P. rachliense</em> is a single species with great genetic diversity. Phylogenetic analysis with COI confirmed that <em>P. rachiliense</em> is a nominal species within the <em>hirtipes</em> species group. Further analyses are needed using genome-wide SNP data with comprehensive sampling to understand deep population structure of <em>P. rachiliense</em> in Türkiye.</div></div>\",\"PeriodicalId\":7240,\"journal\":{\"name\":\"Acta tropica\",\"volume\":\"268 \",\"pages\":\"Article 107694\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2025-06-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta tropica\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0001706X25001706\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PARASITOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta tropica","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0001706X25001706","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PARASITOLOGY","Score":null,"Total":0}
Genetic diversity and population structure of Prosimulium rachiliense Djafarov (Diptera: Simuliidae) inTürkiye
The family Simuliidae contains many cryptic species within multiple species groups. Prosimulium rachiliense Djafarov, a member of the P. hirtipes species group, is widespread throughout Anatolia. Previous chromosomal research revealed that populations of P. rachiliense in western Anatolia differ cytogenetically from populations in Armenia. We used mitochondrial COI and nuclear ITSI-II sequences to perform phylogenetic analysis and species delimitation tests to reveal the genetic diversity of P. rachiliense in Anatolia and to test the possibility of cryptic lineages. Our results indicated two distinct lineages, one in eastern and one in western Türkiye, with significant genetic diversity in both lineages. Although species delimitation tests with COI dataset suggested multiple candidate species, those with ITS I-II and phylogenetic analyses indicated that P. rachliense is a single species with great genetic diversity. Phylogenetic analysis with COI confirmed that P. rachiliense is a nominal species within the hirtipes species group. Further analyses are needed using genome-wide SNP data with comprehensive sampling to understand deep population structure of P. rachiliense in Türkiye.
期刊介绍:
Acta Tropica, is an international journal on infectious diseases that covers public health sciences and biomedical research with particular emphasis on topics relevant to human and animal health in the tropics and the subtropics.