Gang Li , Dan Li , Weibin Zhai , Chang Liu , Mengying Chen , Qingqiang Xu , Yuanlan Huang
{"title":"6PPD和6PPD-醌的呼吸毒性机制:基于网络毒理学和分子对接的综合研究","authors":"Gang Li , Dan Li , Weibin Zhai , Chang Liu , Mengying Chen , Qingqiang Xu , Yuanlan Huang","doi":"10.1016/j.ecoenv.2025.118494","DOIUrl":null,"url":null,"abstract":"<div><div>The widespread distribution of environmental contaminants poses a significant threat to public health. N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine (6PPD) and its ozone-derivative, 6PPD-quinone (6PPD-Q), are emerging pollutants that propagate through particulate matter and aerosols, exerting detrimental effects on the respiratory system. However, their specific pathogenic mechanisms remain unclear. This study employs integrated network toxicology and molecular docking to elucidate the molecular basis of 6PPD/6PPD-Q-induced respiratory toxicity. Respiratory hazard potential was predicted using ADMETlab 3.0 and ProTox-II. Potential targets were identified through multi-database mining (BindingDB, ChEMBL, SwissTargetPrediction, TargetNet), with disease-associated targets categorized into acute and chronic respiratory damage using GeneCards and OMIM. Intersectional analysis via Venn diagrams, STRING, and Cytoscape revealed compound-specific targets (EGFR for 6PPD; FYN for 6PPD-Q) and five shared targets (NR3C1, MAPK14, RELA, CYCS, JAK2). Enrichment analysis using DAVID indicated significant associations with mitochondrial energy metabolism, oxidative stress, apoptosis and neuroactive ligand-receptor interactions (<em>p</em> < 0.05). Molecular docking and molecular dynamics simulations confirmed that both compounds showed high affinity binding to key toxicity targets (binding energy <-20.92 kJ/mol), and revealed the interaction mode of these two compounds with the key target CYCS. Mechanistically, 6PPD and 6PPD-Q disrupt the mitochondrial electron transport chain, dysregulate apoptotic pathways, and activate NF-κB/JAK-STAT inflammatory cascades, leading to respiratory inflammation. This study establishes a comparative toxicological framework for 6PPD and 6PPD-Q, identifying actionable molecular targets and mechanistic pathways for respiratory toxicity, and highlights the utility of computational toxicology strategies in environmental health risk assessment.</div></div>","PeriodicalId":303,"journal":{"name":"Ecotoxicology and Environmental Safety","volume":"301 ","pages":"Article 118494"},"PeriodicalIF":6.1000,"publicationDate":"2025-06-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Respiratory toxicity mechanism of 6PPD and 6PPD-quinone: An integrated study based on network toxicology and molecular docking\",\"authors\":\"Gang Li , Dan Li , Weibin Zhai , Chang Liu , Mengying Chen , Qingqiang Xu , Yuanlan Huang\",\"doi\":\"10.1016/j.ecoenv.2025.118494\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The widespread distribution of environmental contaminants poses a significant threat to public health. N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine (6PPD) and its ozone-derivative, 6PPD-quinone (6PPD-Q), are emerging pollutants that propagate through particulate matter and aerosols, exerting detrimental effects on the respiratory system. However, their specific pathogenic mechanisms remain unclear. This study employs integrated network toxicology and molecular docking to elucidate the molecular basis of 6PPD/6PPD-Q-induced respiratory toxicity. Respiratory hazard potential was predicted using ADMETlab 3.0 and ProTox-II. Potential targets were identified through multi-database mining (BindingDB, ChEMBL, SwissTargetPrediction, TargetNet), with disease-associated targets categorized into acute and chronic respiratory damage using GeneCards and OMIM. Intersectional analysis via Venn diagrams, STRING, and Cytoscape revealed compound-specific targets (EGFR for 6PPD; FYN for 6PPD-Q) and five shared targets (NR3C1, MAPK14, RELA, CYCS, JAK2). Enrichment analysis using DAVID indicated significant associations with mitochondrial energy metabolism, oxidative stress, apoptosis and neuroactive ligand-receptor interactions (<em>p</em> < 0.05). Molecular docking and molecular dynamics simulations confirmed that both compounds showed high affinity binding to key toxicity targets (binding energy <-20.92 kJ/mol), and revealed the interaction mode of these two compounds with the key target CYCS. Mechanistically, 6PPD and 6PPD-Q disrupt the mitochondrial electron transport chain, dysregulate apoptotic pathways, and activate NF-κB/JAK-STAT inflammatory cascades, leading to respiratory inflammation. This study establishes a comparative toxicological framework for 6PPD and 6PPD-Q, identifying actionable molecular targets and mechanistic pathways for respiratory toxicity, and highlights the utility of computational toxicology strategies in environmental health risk assessment.</div></div>\",\"PeriodicalId\":303,\"journal\":{\"name\":\"Ecotoxicology and Environmental Safety\",\"volume\":\"301 \",\"pages\":\"Article 118494\"},\"PeriodicalIF\":6.1000,\"publicationDate\":\"2025-06-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Ecotoxicology and Environmental Safety\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0147651325008395\",\"RegionNum\":2,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENVIRONMENTAL SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecotoxicology and Environmental Safety","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0147651325008395","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENVIRONMENTAL SCIENCES","Score":null,"Total":0}
Respiratory toxicity mechanism of 6PPD and 6PPD-quinone: An integrated study based on network toxicology and molecular docking
The widespread distribution of environmental contaminants poses a significant threat to public health. N-(1,3-dimethylbutyl)-N′-phenyl-p-phenylenediamine (6PPD) and its ozone-derivative, 6PPD-quinone (6PPD-Q), are emerging pollutants that propagate through particulate matter and aerosols, exerting detrimental effects on the respiratory system. However, their specific pathogenic mechanisms remain unclear. This study employs integrated network toxicology and molecular docking to elucidate the molecular basis of 6PPD/6PPD-Q-induced respiratory toxicity. Respiratory hazard potential was predicted using ADMETlab 3.0 and ProTox-II. Potential targets were identified through multi-database mining (BindingDB, ChEMBL, SwissTargetPrediction, TargetNet), with disease-associated targets categorized into acute and chronic respiratory damage using GeneCards and OMIM. Intersectional analysis via Venn diagrams, STRING, and Cytoscape revealed compound-specific targets (EGFR for 6PPD; FYN for 6PPD-Q) and five shared targets (NR3C1, MAPK14, RELA, CYCS, JAK2). Enrichment analysis using DAVID indicated significant associations with mitochondrial energy metabolism, oxidative stress, apoptosis and neuroactive ligand-receptor interactions (p < 0.05). Molecular docking and molecular dynamics simulations confirmed that both compounds showed high affinity binding to key toxicity targets (binding energy <-20.92 kJ/mol), and revealed the interaction mode of these two compounds with the key target CYCS. Mechanistically, 6PPD and 6PPD-Q disrupt the mitochondrial electron transport chain, dysregulate apoptotic pathways, and activate NF-κB/JAK-STAT inflammatory cascades, leading to respiratory inflammation. This study establishes a comparative toxicological framework for 6PPD and 6PPD-Q, identifying actionable molecular targets and mechanistic pathways for respiratory toxicity, and highlights the utility of computational toxicology strategies in environmental health risk assessment.
期刊介绍:
Ecotoxicology and Environmental Safety is a multi-disciplinary journal that focuses on understanding the exposure and effects of environmental contamination on organisms including human health. The scope of the journal covers three main themes. The topics within these themes, indicated below, include (but are not limited to) the following: Ecotoxicology、Environmental Chemistry、Environmental Safety etc.