{"title":"多形Liberiplasma polymorphum gen. nov., sp. nov.,一种从陆相泥火山中分离出来的新型无细胞壁的自由生活厌氧菌。11月和自由等离子体","authors":"M.A. Khomyakova , A.Y. Merkel , A.A. Novikov , A.I. Slobodkin","doi":"10.1016/j.syapm.2025.126629","DOIUrl":null,"url":null,"abstract":"<div><div>A novel anaerobic free-living bacterium (strain C05PYG<sup>T</sup>) was isolated from a terrestrial mud volcano (Taman Peninsula, Russia). Cells were pleomorphic but mainly consisted of small, cell wall-less, non-motile cocci, 0.40–0.46 μm in diameter. The temperature range for growth was 5–37 °C (optimum at 30 °C). The pH range for growth was 7.5–10.0, with an optimum at pH 8.0–9.0. It was a chemoorganoheterotroph, fermenting mono-, di- and polysaccharides (dextrin, starch), proteinaceous substrates and organic acids (lactate and pyruvate). Yeast extract was essential for growth. Strain C05PYG<sup>T</sup> possessed an ability to degrade extraneous DNA. Major cellular fatty acids were C<sub>16:0</sub> and i-C<sub>17:0</sub>; major dimethyl acetals were C<sub>14:0</sub> DMA and i-C<sub>15:0</sub> DMA. The genome of strain C05PYG<sup>T</sup> had a size of 2.0 Mb with a DNA G + C content of 33.0 % (WGS). Phylogenetic analysis based on 120 marker genes placed strain C05PYG<sup>T</sup> in a separate order adjacent to the order <em>Acholeplasmatales</em> within the class <em>Mollicutes</em>, hitherto referred to as “<em>Izemoplasmatales</em>”, which contains no representatives with validly published names. We propose to assign strain C05PYG<sup>T</sup> to a novel species of a novel genus, <em>Liberiplasma polymorphum</em> gen. nov., sp. nov.; the type strain is C05PYG<sup>T</sup> (=VKM B-3767<sup>T</sup> = BIM B-2060<sup>T</sup> = UQM 41800<sup>T</sup>). This genus is placed in a novel family, <em>Liberiplasmataceae</em> fam. nov. within the novel order <em>Liberiplasmatales</em> ord. nov<em>.,</em> class <em>Mollicutes</em>.</div></div>","PeriodicalId":22124,"journal":{"name":"Systematic and applied microbiology","volume":"48 4","pages":"Article 126629"},"PeriodicalIF":3.3000,"publicationDate":"2025-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Liberiplasma polymorphum gen. nov., sp. nov., a novel cell-wall-less free-living anaerobe, isolated from a terrestrial mud volcano, and proposal of Liberiplasmataceae fam. nov. and Liberiplasmatales ord. nov\",\"authors\":\"M.A. Khomyakova , A.Y. Merkel , A.A. Novikov , A.I. Slobodkin\",\"doi\":\"10.1016/j.syapm.2025.126629\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>A novel anaerobic free-living bacterium (strain C05PYG<sup>T</sup>) was isolated from a terrestrial mud volcano (Taman Peninsula, Russia). Cells were pleomorphic but mainly consisted of small, cell wall-less, non-motile cocci, 0.40–0.46 μm in diameter. The temperature range for growth was 5–37 °C (optimum at 30 °C). The pH range for growth was 7.5–10.0, with an optimum at pH 8.0–9.0. It was a chemoorganoheterotroph, fermenting mono-, di- and polysaccharides (dextrin, starch), proteinaceous substrates and organic acids (lactate and pyruvate). Yeast extract was essential for growth. Strain C05PYG<sup>T</sup> possessed an ability to degrade extraneous DNA. Major cellular fatty acids were C<sub>16:0</sub> and i-C<sub>17:0</sub>; major dimethyl acetals were C<sub>14:0</sub> DMA and i-C<sub>15:0</sub> DMA. The genome of strain C05PYG<sup>T</sup> had a size of 2.0 Mb with a DNA G + C content of 33.0 % (WGS). Phylogenetic analysis based on 120 marker genes placed strain C05PYG<sup>T</sup> in a separate order adjacent to the order <em>Acholeplasmatales</em> within the class <em>Mollicutes</em>, hitherto referred to as “<em>Izemoplasmatales</em>”, which contains no representatives with validly published names. We propose to assign strain C05PYG<sup>T</sup> to a novel species of a novel genus, <em>Liberiplasma polymorphum</em> gen. nov., sp. nov.; the type strain is C05PYG<sup>T</sup> (=VKM B-3767<sup>T</sup> = BIM B-2060<sup>T</sup> = UQM 41800<sup>T</sup>). This genus is placed in a novel family, <em>Liberiplasmataceae</em> fam. nov. within the novel order <em>Liberiplasmatales</em> ord. nov<em>.,</em> class <em>Mollicutes</em>.</div></div>\",\"PeriodicalId\":22124,\"journal\":{\"name\":\"Systematic and applied microbiology\",\"volume\":\"48 4\",\"pages\":\"Article 126629\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2025-06-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Systematic and applied microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0723202025000517\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Systematic and applied microbiology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0723202025000517","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Liberiplasma polymorphum gen. nov., sp. nov., a novel cell-wall-less free-living anaerobe, isolated from a terrestrial mud volcano, and proposal of Liberiplasmataceae fam. nov. and Liberiplasmatales ord. nov
A novel anaerobic free-living bacterium (strain C05PYGT) was isolated from a terrestrial mud volcano (Taman Peninsula, Russia). Cells were pleomorphic but mainly consisted of small, cell wall-less, non-motile cocci, 0.40–0.46 μm in diameter. The temperature range for growth was 5–37 °C (optimum at 30 °C). The pH range for growth was 7.5–10.0, with an optimum at pH 8.0–9.0. It was a chemoorganoheterotroph, fermenting mono-, di- and polysaccharides (dextrin, starch), proteinaceous substrates and organic acids (lactate and pyruvate). Yeast extract was essential for growth. Strain C05PYGT possessed an ability to degrade extraneous DNA. Major cellular fatty acids were C16:0 and i-C17:0; major dimethyl acetals were C14:0 DMA and i-C15:0 DMA. The genome of strain C05PYGT had a size of 2.0 Mb with a DNA G + C content of 33.0 % (WGS). Phylogenetic analysis based on 120 marker genes placed strain C05PYGT in a separate order adjacent to the order Acholeplasmatales within the class Mollicutes, hitherto referred to as “Izemoplasmatales”, which contains no representatives with validly published names. We propose to assign strain C05PYGT to a novel species of a novel genus, Liberiplasma polymorphum gen. nov., sp. nov.; the type strain is C05PYGT (=VKM B-3767T = BIM B-2060T = UQM 41800T). This genus is placed in a novel family, Liberiplasmataceae fam. nov. within the novel order Liberiplasmatales ord. nov., class Mollicutes.
期刊介绍:
Systematic and Applied Microbiology deals with various aspects of microbial diversity and systematics of prokaryotes. It focuses on Bacteria and Archaea; eukaryotic microorganisms will only be considered in rare cases. The journal perceives a broad understanding of microbial diversity and encourages the submission of manuscripts from the following branches of microbiology: