从CT血管造影中识别、分割和分型主动脉夹层的全自动流水线。

IF 1.6 4区 医学 Q3 CARDIAC & CARDIOVASCULAR SYSTEMS
Changjin Zhuang, Yanan Wu, Qianqian Qi, Shuiqing Zhao, Yu Sun, Jie Hou, Wei Qian, Benqiang Yang, Shouliang Qi
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引用次数: 0

摘要

目的:主动脉夹层(Aortic夹层,AD)是一种罕见且死亡率高的疾病,需要准确、快速的诊断。本研究开发了一种自动化的深度学习管道,用于使用计算机断层扫描血管造影(CTA)图像识别、分割和斯坦福亚型AD。方法:该管道由主动脉分割、AD识别、真管腔(TL)和假管腔(FL)分割、Stanford亚型分型四个相互关联的模块组成。在主动脉分割模块中,训练了一个3D全分辨率nnU-Net。在AD识别模块中,使用形态学操作提取分割后的主动脉边界,并从多个视图进行投影。然后使用多视图投影数据进行AD识别。对于AD病例,进一步训练3D nnU-Net,基于分割的主动脉进行TL/FL分割。最后,使用分割的TL/FL的多视图最大密度投影来训练Stanford亚型网络。总共收集了386次CTA扫描,用于培训、验证和测试管道。结果:该方法对AD的鉴别准确率为0.979。对于type - a - ad和Type-B-AD的TL/FL分割,TL的平均Dice系数为0.968,FL的平均Dice系数为0.971。对于Stanford亚型分型,多视图方法的准确率为0.990。结论:自动化流水线能够通过CTA图像快速准确地识别、分割AD,并进行Stanford亚型分型,有可能加快AD的诊断和治疗。主动脉节段和TL/FL也可作为医生的参考。代码、模型和管道可以在https://github.com/zhuangCJ/A-pipeline-of-AD.git上公开获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Fully Automatic Pipeline of Identification, Segmentation, and Subtyping of Aortic Dissection from CT Angiography.

Purpose: Aortic dissection (AD) is a rare condition with a high mortality rate, necessitating accurate and rapid diagnosis. This study develops an automated deep learning pipeline for identifying, segmenting, and Stanford subtyping AD using computed tomography angiography (CTA) images.

Methods: This pipeline consists of four interconnected modules: aorta segmentation, AD identification, true lumen (TL) and false lumen (FL) segmentation, and Stanford subtyping. In the aorta segmentation module, a 3D full-resolution nnU-Net is trained. The segmented aorta's boundary is extracted using morphological operations and projected from multiple views in the AD identification module. AD identification is then performed using the multi-view projection data. For AD cases, a 3D nnU-Net is further trained for TL/FL segmentation based on the segmented aorta. Finally, a network is trained for Stanford subtyping using multi-view maximum density projections of the segmented TL/FL. A total of 386 CTA scans were collected for training, validation, and testing of the pipeline.

Results: For AD identification, the method achieved an accuracy of 0.979. The TL/FL segmentation for TypeA-AD and Type-B-AD achieved average Dice coefficient of 0.968 for TL and 0.971 for FL. For Stanford subtyping, the multi-view method achieved an accuracy of 0.990.

Conclusion: The automated pipeline enables rapid and accurate identification, segmentation, and Stanford subtyping of AD using CTA images, potentially accelerating the diagnosis and treatment. The segmented aorta and TL/FL can also serve as references for physicians. The code, models, and pipeline are publicly available at https://github.com/zhuangCJ/A-pipeline-of-AD.git .

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来源期刊
Cardiovascular Engineering and Technology
Cardiovascular Engineering and Technology Engineering-Biomedical Engineering
CiteScore
4.00
自引率
0.00%
发文量
51
期刊介绍: Cardiovascular Engineering and Technology is a journal publishing the spectrum of basic to translational research in all aspects of cardiovascular physiology and medical treatment. It is the forum for academic and industrial investigators to disseminate research that utilizes engineering principles and methods to advance fundamental knowledge and technological solutions related to the cardiovascular system. Manuscripts spanning from subcellular to systems level topics are invited, including but not limited to implantable medical devices, hemodynamics and tissue biomechanics, functional imaging, surgical devices, electrophysiology, tissue engineering and regenerative medicine, diagnostic instruments, transport and delivery of biologics, and sensors. In addition to manuscripts describing the original publication of research, manuscripts reviewing developments in these topics or their state-of-art are also invited.
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