{"title":"在硅筛选,ADMET分析和计算模拟研究中,印度藤黄选择性植物成分作为潜在的抗乳腺癌药物:对被忽视的植物的关键评价。","authors":"Pooja Kushwaha, Sudhir Mehrotra, Rumana Ahmad","doi":"10.1007/s13205-025-04365-8","DOIUrl":null,"url":null,"abstract":"<p><p>This study employed in silico methods to evaluate the antibreast cancer potential of three phytocomponents from <i>Garcinia indica</i> <i>viz.</i> garcinol, anthocyanin, and hydroxycitric acid against nine breast cancer-related protein targets. Molecular docking revealed that garcinol exhibited the strongest binding affinity for BRCA2 (BE - 7.1 kcal/mol, Kd 6.27 µM), anthocyanin for BAX (BE - 7.54 kcal/mol, Kd 2.96 µM) and hydroxycitric acid for BRCA1 (BE - 8.28 kcal/mol, Kd 848.46 nM), outperforming reference drugs doxorubicin and tetracycline. Molecular dynamics simulation of the garcinol-BRCA2 complex demonstrated conformational stability throughout the 100 ns simulation period, supported by consistent RMSD, hydrogen bond count, and compactness metrics (Rg ≈ 1.94-2.0 nm). ADMET and toxicity analyses confirmed favorable drug likeness and non-toxic profiles for the GI phytocomponents. PASS prediction, BOILED-Egg and bioavailability radar assessments further supported their potential as orally bioavailable, CNS-accessible therapeutic candidates. The findings indicate that the relatively unexplored GI possesses a high concentration of pharmacologically active compounds and may serve as an excellent source of novel, natural anticancer agents for future drug development. To the best of our knowledge, this is the first in silico study evaluating the antibreast cancer potential of <i>Garcinia indica</i> phytocompounds.</p>","PeriodicalId":7067,"journal":{"name":"3 Biotech","volume":"15 7","pages":"201"},"PeriodicalIF":2.9000,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12137844/pdf/","citationCount":"0","resultStr":"{\"title\":\"In silico screening, ADMET analysis and computational simulation studies on <i>Garcinia indica</i> Choisy phytoconstituents as prospective antibreast cancer agents: a critical appraisal of the neglected plant.\",\"authors\":\"Pooja Kushwaha, Sudhir Mehrotra, Rumana Ahmad\",\"doi\":\"10.1007/s13205-025-04365-8\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>This study employed in silico methods to evaluate the antibreast cancer potential of three phytocomponents from <i>Garcinia indica</i> <i>viz.</i> garcinol, anthocyanin, and hydroxycitric acid against nine breast cancer-related protein targets. Molecular docking revealed that garcinol exhibited the strongest binding affinity for BRCA2 (BE - 7.1 kcal/mol, Kd 6.27 µM), anthocyanin for BAX (BE - 7.54 kcal/mol, Kd 2.96 µM) and hydroxycitric acid for BRCA1 (BE - 8.28 kcal/mol, Kd 848.46 nM), outperforming reference drugs doxorubicin and tetracycline. Molecular dynamics simulation of the garcinol-BRCA2 complex demonstrated conformational stability throughout the 100 ns simulation period, supported by consistent RMSD, hydrogen bond count, and compactness metrics (Rg ≈ 1.94-2.0 nm). ADMET and toxicity analyses confirmed favorable drug likeness and non-toxic profiles for the GI phytocomponents. PASS prediction, BOILED-Egg and bioavailability radar assessments further supported their potential as orally bioavailable, CNS-accessible therapeutic candidates. The findings indicate that the relatively unexplored GI possesses a high concentration of pharmacologically active compounds and may serve as an excellent source of novel, natural anticancer agents for future drug development. To the best of our knowledge, this is the first in silico study evaluating the antibreast cancer potential of <i>Garcinia indica</i> phytocompounds.</p>\",\"PeriodicalId\":7067,\"journal\":{\"name\":\"3 Biotech\",\"volume\":\"15 7\",\"pages\":\"201\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2025-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12137844/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"3 Biotech\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1007/s13205-025-04365-8\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/6/4 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"3 Biotech","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1007/s13205-025-04365-8","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/6/4 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
In silico screening, ADMET analysis and computational simulation studies on Garcinia indica Choisy phytoconstituents as prospective antibreast cancer agents: a critical appraisal of the neglected plant.
This study employed in silico methods to evaluate the antibreast cancer potential of three phytocomponents from Garcinia indicaviz. garcinol, anthocyanin, and hydroxycitric acid against nine breast cancer-related protein targets. Molecular docking revealed that garcinol exhibited the strongest binding affinity for BRCA2 (BE - 7.1 kcal/mol, Kd 6.27 µM), anthocyanin for BAX (BE - 7.54 kcal/mol, Kd 2.96 µM) and hydroxycitric acid for BRCA1 (BE - 8.28 kcal/mol, Kd 848.46 nM), outperforming reference drugs doxorubicin and tetracycline. Molecular dynamics simulation of the garcinol-BRCA2 complex demonstrated conformational stability throughout the 100 ns simulation period, supported by consistent RMSD, hydrogen bond count, and compactness metrics (Rg ≈ 1.94-2.0 nm). ADMET and toxicity analyses confirmed favorable drug likeness and non-toxic profiles for the GI phytocomponents. PASS prediction, BOILED-Egg and bioavailability radar assessments further supported their potential as orally bioavailable, CNS-accessible therapeutic candidates. The findings indicate that the relatively unexplored GI possesses a high concentration of pharmacologically active compounds and may serve as an excellent source of novel, natural anticancer agents for future drug development. To the best of our knowledge, this is the first in silico study evaluating the antibreast cancer potential of Garcinia indica phytocompounds.
3 BiotechAgricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
CiteScore
6.00
自引率
0.00%
发文量
314
期刊介绍:
3 Biotech publishes the results of the latest research related to the study and application of biotechnology to:
- Medicine and Biomedical Sciences
- Agriculture
- The Environment
The focus on these three technology sectors recognizes that complete Biotechnology applications often require a combination of techniques. 3 Biotech not only presents the latest developments in biotechnology but also addresses the problems and benefits of integrating a variety of techniques for a particular application. 3 Biotech will appeal to scientists and engineers in both academia and industry focused on the safe and efficient application of Biotechnology to Medicine, Agriculture and the Environment.