虎鲨(Galeocerdo cuvier)精细遗传结构的证据突出了分层抽样制度的重要性

IF 3.2 2区 生物学 Q1 EVOLUTIONARY BIOLOGY
Jessica J. Fish, Christine Dudgeon, Adam Barnett, Paul A. Butcher, Bonnie J. Holmes, Charlie Huveneers, Lauren Meyer, Laurent Vigliola, Craig D. H. Sherman, Adam D. Miller
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引用次数: 0

摘要

了解种群之间的生物学联系对野生动物的管理和保护至关重要。遗传研究在表征这些联系方面发挥着核心作用,但通常需要分层抽样制度来评估基因流动的空间范围和强度,以及性别和个体发育对连接模式的相对影响。然而,这在一些研究系统中可能具有挑战性,特别是在鲨鱼等大型海洋物种中,遗传研究往往依赖于在大空间尺度上进行的机会性和/或抽样。我们证明了分层采样对识别澳大利亚东部虎鲨(Galeocerdo cuvier)以前未被发现的遗传结构的重要性,那里以前报道过泛群。我们对414条虎鲨进行了种群基因组分析,包括雄性和雌性,幼年-亚成年和成年阶段,分布在澳大利亚东部和印度太平洋地区约3000公里的21个地点。与以前的研究类似,我们证明了整个采样区域缺乏整体遗传结构;然而,我们的分析显示了空间自相关和局部遗传结构在幼年-亚成年雌性虎鲨中的证据。这些结果指出了性别和个体发育对澳大利亚虎鲨种群遗传结构和连通性模式的潜在影响。我们在虎鲨种群的基本栖息地以及在缺乏适当采样制度的情况下夸大鲨鱼种群之间生物联系强度的风险的背景下讨论了这些发现。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Evidence of Fine-Scale Genetic Structure in Tiger Sharks (Galeocerdo cuvier) Highlights the Importance of Stratified Sampling Regimes

Evidence of Fine-Scale Genetic Structure in Tiger Sharks (Galeocerdo cuvier) Highlights the Importance of Stratified Sampling Regimes

Understanding the biological connections between populations is essential to wildlife management and conservation. Genetic studies play a central role in characterizing these connections, but typically require stratified sampling regimes to assess the spatial extent and strength of gene flow, and the relative influences of sex and ontogeny on patterns of connectivity. Yet, this can be challenging in some study systems, particularly in large marine species such as sharks, where genetic studies often rely on opportunistic and/or sampling conducted over large spatial scales. We demonstrate the importance of stratified sampling to identify previously undetected genetic structure in tiger sharks (Galeocerdo cuvier) off eastern Australia, where panmixia has been previously reported. We performed population genomic analyses on 414 tiger sharks, representing males and females and both juvenile-subadult and adult-life stages, and 21 locations spanning approximately 3000 km of eastern Australia and the Indo-Pacific region. Similar to previous studies, we demonstrate a lack of overall genetic structure across the sampling area; however, our analysis shows evidence of spatial autocorrelation and local genetic structuring in juvenile-subadult female tiger sharks. These results point to potential influences of sex and ontogeny on patterns of population genetic structure and connectivity in Australian tiger sharks. We discuss these findings in the context of essential habitats supporting tiger shark populations and risks of overstating the strength of biological connections among shark populations in the absence of appropriate sampling regimes.

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来源期刊
Evolutionary Applications
Evolutionary Applications 生物-进化生物学
CiteScore
8.50
自引率
7.30%
发文量
175
审稿时长
6 months
期刊介绍: Evolutionary Applications is a fully peer reviewed open access journal. It publishes papers that utilize concepts from evolutionary biology to address biological questions of health, social and economic relevance. Papers are expected to employ evolutionary concepts or methods to make contributions to areas such as (but not limited to): medicine, agriculture, forestry, exploitation and management (fisheries and wildlife), aquaculture, conservation biology, environmental sciences (including climate change and invasion biology), microbiology, and toxicology. All taxonomic groups are covered from microbes, fungi, plants and animals. In order to better serve the community, we also now strongly encourage submissions of papers making use of modern molecular and genetic methods (population and functional genomics, transcriptomics, proteomics, epigenetics, quantitative genetics, association and linkage mapping) to address important questions in any of these disciplines and in an applied evolutionary framework. Theoretical, empirical, synthesis or perspective papers are welcome.
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