Caiyin Tang, Wentao Han, Shaowen Ke, Danyang Wang, Kai Chen, Lisui Bao, Lei Guan, Jingjie Hu, Shi Wang, Zhenmin Bao
{"title":"Podabacia甲壳动物线粒体全基因组及系统发育分析(Pallas, 1766)。","authors":"Caiyin Tang, Wentao Han, Shaowen Ke, Danyang Wang, Kai Chen, Lisui Bao, Lei Guan, Jingjie Hu, Shi Wang, Zhenmin Bao","doi":"10.1080/23802359.2025.2512867","DOIUrl":null,"url":null,"abstract":"<p><p>The coral genus <i>Podabacia serves as a bioindicator of offshore environments.</i> This study presents an updated complete mitochondrial genome of <i>Podabacia crustacea</i> (Pallas, 1766). The final mitogenome spans 17,009 bp in length and contains 13 protein-coding genes, two transfer RNA genes, and two ribosomal RNA genes. It is worth noting that a previously published misannotation of the cytochrome c oxidase subunit I (<i>COX1</i>) gene has been corrected. Furthermore,the maximum-likelihood (ML) phylogenetic analysis revealed that the Fungiidae family clusters within the 'Robusta' clade. The mitogenome of <i>P. crustacea</i> provides a valuable resource for coral phylogenetic research.</p>","PeriodicalId":18647,"journal":{"name":"Mitochondrial DNA. Part B, Resources","volume":"10 7","pages":"537-542"},"PeriodicalIF":0.7000,"publicationDate":"2025-06-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12135088/pdf/","citationCount":"0","resultStr":"{\"title\":\"Complete mitochondrial genome and phylogenetic analysis of <i>Podabacia crustacea</i> (Pallas, 1766).\",\"authors\":\"Caiyin Tang, Wentao Han, Shaowen Ke, Danyang Wang, Kai Chen, Lisui Bao, Lei Guan, Jingjie Hu, Shi Wang, Zhenmin Bao\",\"doi\":\"10.1080/23802359.2025.2512867\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The coral genus <i>Podabacia serves as a bioindicator of offshore environments.</i> This study presents an updated complete mitochondrial genome of <i>Podabacia crustacea</i> (Pallas, 1766). The final mitogenome spans 17,009 bp in length and contains 13 protein-coding genes, two transfer RNA genes, and two ribosomal RNA genes. It is worth noting that a previously published misannotation of the cytochrome c oxidase subunit I (<i>COX1</i>) gene has been corrected. Furthermore,the maximum-likelihood (ML) phylogenetic analysis revealed that the Fungiidae family clusters within the 'Robusta' clade. The mitogenome of <i>P. crustacea</i> provides a valuable resource for coral phylogenetic research.</p>\",\"PeriodicalId\":18647,\"journal\":{\"name\":\"Mitochondrial DNA. Part B, Resources\",\"volume\":\"10 7\",\"pages\":\"537-542\"},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2025-06-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12135088/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mitochondrial DNA. Part B, Resources\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2025.2512867\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mitochondrial DNA. Part B, Resources","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2025.2512867","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
Complete mitochondrial genome and phylogenetic analysis of Podabacia crustacea (Pallas, 1766).
The coral genus Podabacia serves as a bioindicator of offshore environments. This study presents an updated complete mitochondrial genome of Podabacia crustacea (Pallas, 1766). The final mitogenome spans 17,009 bp in length and contains 13 protein-coding genes, two transfer RNA genes, and two ribosomal RNA genes. It is worth noting that a previously published misannotation of the cytochrome c oxidase subunit I (COX1) gene has been corrected. Furthermore,the maximum-likelihood (ML) phylogenetic analysis revealed that the Fungiidae family clusters within the 'Robusta' clade. The mitogenome of P. crustacea provides a valuable resource for coral phylogenetic research.
期刊介绍:
This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.