黑加仑瘿螨亚科(瘿螨总科,瘿螨科)单系的有丝分裂学证据。

IF 1.8 2区 农林科学 Q2 ENTOMOLOGY
Vladimir D Gankevich, Philipp E Chetverikov
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引用次数: 0

摘要

鞘翅螨超科是一种高度小型化、寄主特异性的植食性螨类,与土壤线虫螨密切相关。数量有限的可靠形态特征,多重同源性和大量的隐种阻碍了这一类群的系统分类。大多数最近的角形总科多基因系统发育受到采样不完整、包含错误序列和不可靠比对导致生物学上不一致的结果的影响。在本研究中,我们获得了5个新的拟角虫有丝分裂基因组,并重新分析了Zhang等(2024)的有丝分裂基因组数据集,以验证他们关于拟角虫亚科多聚性的结论。我们发现这是基于错误地将phyllocoptine序列OQ615736鉴定为盲树碱分类单元。我们的分析表明,一组7个有丝分裂基因组序列归属于Cecidophyes属、Cecidophyopsis属、coptophyla属、Cosetacus属和Glyptacus属形成了一个单系类群,该类群本身被划分为两个分支,分别对应于先前已知的Colomerini和Cecidophyini族。然而,没有发现盲肠虫科特有的线粒体基因簇。盲肠虫科的基因顺序变异性较低,只涉及控制区和tRNA基因trnC和trnI的位置。核苷酸多样性分析表明,三个线粒体蛋白编码基因(COX1, COX3和CYTB)是未来类角膜瘤研究的有希望的分子标记,而基因ATP8, NAD4L, NAD5, NAD6是高可变的,应谨慎使用甚至排除(ATP8)多基因系统发育分析。最后,我们在GenBank中发现了许多不正确的类风湿螨序列,强调了对公共数据库中存储的所有类风湿螨序列进行全面修订的迫切需要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Mitogenomic evidence for the monophyly of blackcurrant gall mite subfamily Cecidophyinae (Eriophyoidea, Eriophyidae).

Superfamily Eriophyoidea is a group of highly miniaturized and host-specific phytophagous acariform mites closely related to the soil-dwelling nematalycid mites. Limited number of reliable morphological characters, multiple homoplasies, and numerous cryptic species impede systematics of this group. Most recent multigene phylogenies of Eriophyoidea suffer from incomplete sampling, inclusion of erroneous sequences, and unreliable alignments resulting in biologically inconsistent results. In this study, we obtained five new mitogenomes of eriophyoids and reanalyzed the mitogenomic dataset by Zhang et al. (2024) in order to test their conclusion on the polyphyly of the subfamily Cecidophyinae. We found out that it was based on the wrong identification of the phyllocoptine sequence OQ615736 as a cecidophyine taxon. Our analysis showed that a group of seven mitogenomic sequences assigned to cecidophyine genera Cecidophyes, Cecidophyopsis, Coptophylla, Cosetacus, and Glyptacus form a monophyletic group, which was itself divided into two clades corresponding to previously recognized tribes Colomerini and Cecidophyini. However, no mitochondrial gene clusters unique to Cecidophyinae were found. Gene order variability in Cecidophyinae is low and concerns only positions of the control region and tRNA genes trnC and trnI. Analysis of nucleotide diversity showed that three mitochondrial protein coding genes (COX1, COX3 and CYTB) are promising molecular markers for future eriophyoid studies, whereas genes ATP8, NAD4L, NAD5, NAD6 are hypervariable and should be used with caution or even excluded (ATP8) from multigene phylogenetic analyses. Finally, we identified numerous sequences of Eriophyoidea in GenBank with incorrect taxonomic affinities, underscoring the urgent need for a comprehensive revision of all eriophyoid mite sequences deposited in public databases.

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来源期刊
CiteScore
3.90
自引率
9.10%
发文量
81
审稿时长
4-8 weeks
期刊介绍: Experimental and Applied Acarology publishes peer-reviewed original papers describing advances in basic and applied research on mites and ticks. Coverage encompasses all Acari, including those of environmental, agricultural, medical and veterinary importance, and all the ways in which they interact with other organisms (plants, arthropods and other animals). The subject matter draws upon a wide variety of disciplines, including evolutionary biology, ecology, epidemiology, physiology, biochemistry, toxicology, immunology, genetics, molecular biology and pest management sciences.
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