在多个GEO数据集中使用WGCNA鉴定脓毒症患儿的关键基因。

IF 2.1 3区 医学 Q2 PEDIATRICS
Frontiers in Pediatrics Pub Date : 2025-05-16 eCollection Date: 2025-01-01 DOI:10.3389/fped.2025.1518908
Yue-Chuan Shen, Dao-Jun Yu, Ze Yu, Xue Zhao
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引用次数: 0

摘要

儿童败血症是一种严重的疾病,由于免疫失调导致器官衰竭,与高发病率和死亡率有关,突出了快速发现和治疗的必要性。本研究旨在利用来自基因表达综合数据库的三个基因表达数据集,确定与儿童脓毒症相关的关键基因。我们首先用R识别差异表达基因(deg),然后进行基因集富集分析,并将deg与加权基因共表达网络分析中的重要模块基因进行整合。我们还筛选成人脓毒症数据集,寻找儿童病例特异性基因,最终证实XCL1是一个关键基因。本研究提示XCL1对于了解儿童脓毒症病因及其分子机制至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of the key genes in children with sepsis by WGCNA in multiple GEO datasets.

Pediatric sepsis is a serious condition causing organ failure owing to immune dysregulation, linked to high morbidity and mortality, highlighting the need for quick detection and treatment. This study aims to identify key genes involved in pediatric sepsis using three gene expression datasets from the Gene Expression Omnibus. We first identified differentially expressed genes (DEGs) with R, then conducted a gene set enrichment analysis, and integrated DEGs with important module genes from weighted gene coexpression network analysis. We also screened adult sepsis datasets to find genes specific to pediatric cases, ultimately validating XCL1 as a key gene. This study suggests that XCL1 is crucial in understanding pediatric sepsis etiology and its molecular mechanisms.

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来源期刊
Frontiers in Pediatrics
Frontiers in Pediatrics Medicine-Pediatrics, Perinatology and Child Health
CiteScore
3.60
自引率
7.70%
发文量
2132
审稿时长
14 weeks
期刊介绍: Frontiers in Pediatrics (Impact Factor 2.33) publishes rigorously peer-reviewed research broadly across the field, from basic to clinical research that meets ongoing challenges in pediatric patient care and child health. Field Chief Editors Arjan Te Pas at Leiden University and Michael L. Moritz at the Children''s Hospital of Pittsburgh are supported by an outstanding Editorial Board of international experts. This multidisciplinary open-access journal is at the forefront of disseminating and communicating scientific knowledge and impactful discoveries to researchers, academics, clinicians and the public worldwide. Frontiers in Pediatrics also features Research Topics, Frontiers special theme-focused issues managed by Guest Associate Editors, addressing important areas in pediatrics. In this fashion, Frontiers serves as an outlet to publish the broadest aspects of pediatrics in both basic and clinical research, including high-quality reviews, case reports, editorials and commentaries related to all aspects of pediatrics.
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