物理先验均值驱动贝叶斯委员会分子动力学(BCMD):从Born-Oppenheimer动力学到曲率引导的非绝热动力学。

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL
Chong Teng,  and , Junwei Lucas Bao*, 
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引用次数: 0

摘要

分子动力学(MD),当与高精度量子力学相结合用于能量和原子力评估时,是广泛用于揭示化学过程的深入原子细节的不可或缺的工具。然而,第一性原理预测的计算成本可能令人望而却步。本文介绍了一种直接动力学方法——贝叶斯委员会分子动力学(BCMD),该方法将贝叶斯学习与物理先验均值相结合,有效地构建了动态势能面(PESs)。这种方法减少了量子力学(QM)的评估,同时保持了核运动传播的高精度。学习到的代理表面通过引导进一步的原子运动来提高动力学的效率。我们将BCMD应用于基态热化学和非绝热光化学,证明了它在不同电子结构体系中的通用性。我们的方法具有很高的数据效率,并将化学动力学知识嵌入到学习中,为机制探索,光化学和大气化学提供了领域知识,基于代理的从头算MD。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Physical Prior Mean-Driven Bayesian Committee Molecular Dynamics (BCMD): From Born–Oppenheimer Dynamics to Curvature-Guided Non-Adiabatic Dynamics

Physical Prior Mean-Driven Bayesian Committee Molecular Dynamics (BCMD): From Born–Oppenheimer Dynamics to Curvature-Guided Non-Adiabatic Dynamics

Molecular dynamics (MD), when combined with high-accuracy quantum mechanics for energy and atomic force evaluations, is an indispensable tool extensively used to uncover in-depth atomistic details of chemical processes. However, the computational cost of first-principles predictions can be prohibitive. Here, we introduce a direct dynamics method, Bayesian Committee molecular dynamics (BCMD), which integrates Bayesian learning with a physically informed prior mean to efficiently construct potential energy surfaces (PESs) on the fly. This approach reduces quantum mechanical (QM) evaluations while maintaining high accuracy in nuclear motion propagation. The learned surrogate surfaces enhance the efficiency of the dynamics by guiding further atomic motions. We apply BCMD to both ground-state thermal chemistry and nonadiabatic photochemistry, demonstrating its versatility across different electronic structure regimes. Our approach is highly data-efficient and embeds chemical dynamics knowledge into the learning, enabling domain knowledge-informed, surrogate-based ab initio MD for mechanism exploration, photochemistry, and atmospheric chemistry.

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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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