{"title":"调整PRISMA指南以提高遗传关联研究的报告质量:一项框架建议。","authors":"Rezvan Nezameslami, Alireza Nezameslami, Bahareh Mehdikhani, Alireza Mosavi-Jarrahi, Amirhossein Shahbazi, Amirhossein Rahmani, Ali Masoudi, Maryam Yeganegi, Razieh Akhondzardaini, Mohammad Bahrami, Kazem Aghili, Hossein Neamatzadeh","doi":"10.31557/APJCP.2025.26.5.1641","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>To propose a framework for enhancing the reporting quality of genetic association studies by adapting the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines.</p><p><strong>Methods: </strong>A systematic review was performed on case-control and cohort studies published in peer-reviewed journals up to October 7, 2024. Eligible studies reported on single nucleotide polymorphisms (SNPs) and gene expression profiles. Data collection consisted of a thorough examination of methodologies, population stratification, phenotype definitions, and ethical aspects concerning informed consent and data sharing.</p><p><strong>Results: </strong>The adaptation of the PRISMA guidelines created a cohesive reporting framework that improved reproducibility in 67% of 150 studies reviewed, up from 34% before the adaptation. Reported biases significantly decreased, with population stratification issues falling from 42% to 18% (p<0.01). Comprehensive reporting of genetic variants rose from 50% to 85% post-adaptation, aiding biological interpretation of results. A literature review found that only 60% of analyzed meta-analyses adhered to PRISMA standards, revealing notable deficiencies in sample characteristics, methodologies, and statistical reporting, including effect sizes and confidence intervals. Expert consultations indicated a need for clearer guidelines on population stratification, sample selection criteria, and gene-environment interactions. Recommendations for PRISMA adaptation include specific reporting items for genetic nuances, standardized methodologies, and attention to ethical considerations in genetic research. A proposed framework for ongoing evaluation and updates will emphasize interdisciplinary collaboration and transparency to enhance the reproducibility and credibility of genetic research findings.</p><p><strong>Conclusion: </strong>The customized adaptation of PRISMA guidelines greatly improves the methodological quality and ethical standards of genetic association studies, enhancing the integrity and validity of research findings. These adaptations mark a critical advancement in the rigor and transparency of such research. By tackling the complexities of genetic data, researchers can enhance the comparability and reproducibility of their results, thereby furthering personalized medicine and public health.</p>","PeriodicalId":55451,"journal":{"name":"Asian Pacific Journal of Cancer Prevention","volume":"26 5","pages":"1641-1651"},"PeriodicalIF":0.0000,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12290203/pdf/","citationCount":"0","resultStr":"{\"title\":\"Adapting PRISMA Guidelines to Enhance Reporting Quality in Genetic Association Studies: A Framework Proposal.\",\"authors\":\"Rezvan Nezameslami, Alireza Nezameslami, Bahareh Mehdikhani, Alireza Mosavi-Jarrahi, Amirhossein Shahbazi, Amirhossein Rahmani, Ali Masoudi, Maryam Yeganegi, Razieh Akhondzardaini, Mohammad Bahrami, Kazem Aghili, Hossein Neamatzadeh\",\"doi\":\"10.31557/APJCP.2025.26.5.1641\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objective: </strong>To propose a framework for enhancing the reporting quality of genetic association studies by adapting the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines.</p><p><strong>Methods: </strong>A systematic review was performed on case-control and cohort studies published in peer-reviewed journals up to October 7, 2024. Eligible studies reported on single nucleotide polymorphisms (SNPs) and gene expression profiles. Data collection consisted of a thorough examination of methodologies, population stratification, phenotype definitions, and ethical aspects concerning informed consent and data sharing.</p><p><strong>Results: </strong>The adaptation of the PRISMA guidelines created a cohesive reporting framework that improved reproducibility in 67% of 150 studies reviewed, up from 34% before the adaptation. Reported biases significantly decreased, with population stratification issues falling from 42% to 18% (p<0.01). Comprehensive reporting of genetic variants rose from 50% to 85% post-adaptation, aiding biological interpretation of results. A literature review found that only 60% of analyzed meta-analyses adhered to PRISMA standards, revealing notable deficiencies in sample characteristics, methodologies, and statistical reporting, including effect sizes and confidence intervals. Expert consultations indicated a need for clearer guidelines on population stratification, sample selection criteria, and gene-environment interactions. Recommendations for PRISMA adaptation include specific reporting items for genetic nuances, standardized methodologies, and attention to ethical considerations in genetic research. A proposed framework for ongoing evaluation and updates will emphasize interdisciplinary collaboration and transparency to enhance the reproducibility and credibility of genetic research findings.</p><p><strong>Conclusion: </strong>The customized adaptation of PRISMA guidelines greatly improves the methodological quality and ethical standards of genetic association studies, enhancing the integrity and validity of research findings. These adaptations mark a critical advancement in the rigor and transparency of such research. By tackling the complexities of genetic data, researchers can enhance the comparability and reproducibility of their results, thereby furthering personalized medicine and public health.</p>\",\"PeriodicalId\":55451,\"journal\":{\"name\":\"Asian Pacific Journal of Cancer Prevention\",\"volume\":\"26 5\",\"pages\":\"1641-1651\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12290203/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Asian Pacific Journal of Cancer Prevention\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.31557/APJCP.2025.26.5.1641\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"Medicine\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Asian Pacific Journal of Cancer Prevention","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.31557/APJCP.2025.26.5.1641","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"Medicine","Score":null,"Total":0}
Adapting PRISMA Guidelines to Enhance Reporting Quality in Genetic Association Studies: A Framework Proposal.
Objective: To propose a framework for enhancing the reporting quality of genetic association studies by adapting the Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) guidelines.
Methods: A systematic review was performed on case-control and cohort studies published in peer-reviewed journals up to October 7, 2024. Eligible studies reported on single nucleotide polymorphisms (SNPs) and gene expression profiles. Data collection consisted of a thorough examination of methodologies, population stratification, phenotype definitions, and ethical aspects concerning informed consent and data sharing.
Results: The adaptation of the PRISMA guidelines created a cohesive reporting framework that improved reproducibility in 67% of 150 studies reviewed, up from 34% before the adaptation. Reported biases significantly decreased, with population stratification issues falling from 42% to 18% (p<0.01). Comprehensive reporting of genetic variants rose from 50% to 85% post-adaptation, aiding biological interpretation of results. A literature review found that only 60% of analyzed meta-analyses adhered to PRISMA standards, revealing notable deficiencies in sample characteristics, methodologies, and statistical reporting, including effect sizes and confidence intervals. Expert consultations indicated a need for clearer guidelines on population stratification, sample selection criteria, and gene-environment interactions. Recommendations for PRISMA adaptation include specific reporting items for genetic nuances, standardized methodologies, and attention to ethical considerations in genetic research. A proposed framework for ongoing evaluation and updates will emphasize interdisciplinary collaboration and transparency to enhance the reproducibility and credibility of genetic research findings.
Conclusion: The customized adaptation of PRISMA guidelines greatly improves the methodological quality and ethical standards of genetic association studies, enhancing the integrity and validity of research findings. These adaptations mark a critical advancement in the rigor and transparency of such research. By tackling the complexities of genetic data, researchers can enhance the comparability and reproducibility of their results, thereby furthering personalized medicine and public health.
期刊介绍:
Cancer is a very complex disease. While many aspects of carcinoge-nesis and oncogenesis are known, cancer control and prevention at the community level is however still in its infancy. Much more work needs to be done and many more steps need to be taken before effective strategies are developed. The multidisciplinary approaches and efforts to understand and control cancer in an effective and efficient manner, require highly trained scientists in all branches of the cancer sciences, from cellular and molecular aspects to patient care and palliation.
The Asia Pacific Organization for Cancer Prevention (APOCP) and its official publication, the Asia Pacific Journal of Cancer Prevention (APJCP), have served the community of cancer scientists very well and intends to continue to serve in this capacity to the best of its abilities. One of the objectives of the APOCP is to provide all relevant and current scientific information on the whole spectrum of cancer sciences. They aim to do this by providing a forum for communication and propagation of original and innovative research findings that have relevance to understanding the etiology, progression, treatment, and survival of patients, through their journal. The APJCP with its distinguished, diverse, and Asia-wide team of editors, reviewers, and readers, ensure the highest standards of research communication within the cancer sciences community across Asia as well as globally.
The APJCP publishes original research results under the following categories:
-Epidemiology, detection and screening.
-Cellular research and bio-markers.
-Identification of bio-targets and agents with novel mechanisms of action.
-Optimal clinical use of existing anti-cancer agents, including combination therapies.
-Radiation and surgery.
-Palliative care.
-Patient adherence, quality of life, satisfaction.
-Health economic evaluations.