利用强化生物信息学分析和机器学习技术鉴定MASLD的致病机制和诊断中枢基因。

IF 2.6 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
PLoS ONE Pub Date : 2025-05-28 eCollection Date: 2025-01-01 DOI:10.1371/journal.pone.0324972
Hong Lu, Ziyong Mao, Mengyao Zheng, Min Zhang, Heqing Huang, Yiling Chen, Long Lv, Zutao Chen
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引用次数: 0

摘要

代谢功能障碍相关脂肪变性肝病(MASLD)是一种由多种病因引起的异质性疾病。它的特点是肝脏中脂肪堆积过多。如果不进行干预,MASLD可以从脂肪变性发展为代谢功能障碍相关脂肪性肝炎(MASH)、纤维化,甚至发展为肝硬化和肝细胞癌。然而,MASH的发病机制和纤维化发生的机制仍然知之甚少,这给准确诊断MASH和纤维化带来了挑战。在本研究中,我们分析了来自多个数据集的健康个体和MASLD患者的组织RNA-seq数据和临床信息,分别筛选了MASLD、MASH和纤维化发生和发展的关键基因和通路。我们的研究结果表明,MASLD、MASH和纤维化的发展与脂质代谢过程有关。基于已鉴定中心基因的RNA表达谱,我们建立了MASLD、MASH和纤维化的三种替代诊断模型。这些模型在MASLD、MASH和纤维化的诊断中表现优异,AUC值均超过0.9,在疾病诊断中具有潜在的临床价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Identification of hub gene for the pathogenic mechanism and diagnosis of MASLD by enhanced bioinformatics analysis and machine learning.

Identification of hub gene for the pathogenic mechanism and diagnosis of MASLD by enhanced bioinformatics analysis and machine learning.

Identification of hub gene for the pathogenic mechanism and diagnosis of MASLD by enhanced bioinformatics analysis and machine learning.

Identification of hub gene for the pathogenic mechanism and diagnosis of MASLD by enhanced bioinformatics analysis and machine learning.

Metabolic dysfunction-associated steatotic liver disease (MASLD) is a heterogeneous disease caused by multiple etiologies. It is characterized by excessive fat accumulation in the liver. Without intervention, MASLD can progress from steatosis to metabolic dysfunction-associated steatohepatitis (MASH), fibrosis and even to cirrhosis and hepatocellular carcinoma. However, the pathogenesis of MASH and the mechanism underlying the development of fibrosis remain poorly understood, posing challenges for accurate diagnosis of MASH and fibrosis. In this study, we analyzed tissue RNA-seq data and clinical information of healthy individuals and MASLD patients from multiple datasets, the key genes and pathways involved in the occurrence and progression of MASLD, MASH, and fibrosis were screened respectively. Our findings reveal that the development of MASLD, MASH and fibrosis is associated with lipid metabolism processes. Based on the RNA expression profiles of identified hub genes, we established three alternative diagnostic models for MASLD, MASH, and fibrosis. These models demonstrated excellent performance in the diagnosis of MASLD, MASH, and fibrosis, with AUC values exceeding 0.9, implicating its potential clinical values in disease diagnosis.

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来源期刊
PLoS ONE
PLoS ONE 生物-生物学
CiteScore
6.20
自引率
5.40%
发文量
14242
审稿时长
3.7 months
期刊介绍: PLOS ONE is an international, peer-reviewed, open-access, online publication. PLOS ONE welcomes reports on primary research from any scientific discipline. It provides: * Open-access—freely accessible online, authors retain copyright * Fast publication times * Peer review by expert, practicing researchers * Post-publication tools to indicate quality and impact * Community-based dialogue on articles * Worldwide media coverage
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