用一种新的混杂校正机器学习方法估计活体肝移植的个性化生存效益

IF 26.8 1区 医学 Q1 GASTROENTEROLOGY & HEPATOLOGY
Anirudh Gangadhar, Bima J. Hasjim, Xun Zhao, Yingji Sun, Joseph Chon, Aman Sidhu, Elmar Jaeckel, Nazia Selzner, Mark S. Cattral, Blayne A. Sayed, Michael Brudno, Chris McIntosh, Mamatha Bhat
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引用次数: 0

摘要

背景,许多临床问题,如估计活体供体(LDLT)和死亡供体肝移植(DDLT)之间的生存差异,仅限于观察性研究,不能通过随机对照试验(rct)来回答。因此,我们开发了决策路径相似匹配(DPSM),这是一种新的基于机器学习(ML)的算法,它模拟了类似rct的条件,以减轻观测数据中的混杂因素。方法:我们对2002-2023年间来自移植接受者科学登记(SRTR)数据库的成人(≥18岁)移植候选人进行了回顾性研究。随机森林(RF)分类器被训练来根据临床人口学特征预测移植类型。超参数调优后,提取个体患者的决策路径,并计算每个LDLT-DDLT决策路径对的树平均汉明距离()。基于最小化所有患者对的总数,在LDLT和DDLT患者之间进行一对一的算法匹配。随机生存森林(RSF)模型在匹配的队列上进行训练,以预测移植后的生存。结果72581例接受肝移植者中,93.8%为DDLT, 6.2%为LDLT。在将LDLT与DDLT受体匹配后,DPSM成功地减少了混杂关联,如匹配后auroc从0.82降至0.51所示。随后,RSF (C-indexldlt=0.67, C-indexddlt=0.74)优于传统Cox模型(C-indexldlt=0.57, C-indexddlt=0.65)。预测LDLT比DDLT的10年平均生存增加10.3% (SD = 5.7%)。特别是,与其他病因相比,PSC(12.4±5.3%)和HCV(12.1±4.7%)从LDLT中获得的生存获益最高。结论sdpsm提供了一种有效的方法,可以从观察数据中创建类似rct的可比性,以预测哪些患者将从LDLT中获益最多。这种新颖的基于ml的方法可以实现个性化的生存预测,同时最大限度地减少混杂因素,并为临床医生提供更自信地评估治疗效果的新工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Personalized survival benefit estimation from living donor liver transplantation with a novel machine learning method for confounding adjustment

Personalized survival benefit estimation from living donor liver transplantation with a novel machine learning method for confounding adjustment

Background & Aims

Many clinical questions, such as estimating survival differences between living donor (LDLT) and deceased donor liver transplantation (DDLT), are limited to observational studies and cannot be answered through randomized controlled trials (RCTs). Thus, we developed Decision Path Similarity Matching (DPSM), a novel machine learning (ML)-based algorithm that simulates RCT-like conditions to mitigate confounders in observational data.

Methods

We conducted a retrospective study of adult (≥18-years-old) LT candidates between 2002-2023 from the Scientific Registry of Transplant Recipients (SRTR) database. A Random Forest (RF) classifier was trained to predict transplant type from clinicodemographic characteristics. After hyperparameter tuning, decision paths for individual patients were extracted and tree-averaged Hamming distances () were computed for every LDLT-DDLT decision path pair. One-to-one matching was algorithmically performed between LDLT and DDLT patients based on minimizing total across all patient pairs. Random Survival Forest (RSF) models were trained on the matched cohorts to predict post-transplant survival.

Results

Of 72,581 LT recipients, 93.8% were DDLT while 6.2% were LDLT. After matching LDLT with DDLT recipients, DPSM successfully reduced confounding associations as shown by a decrease in AUROCpost-match from 0.82 to 0.51. Subsequently, RSF (C-indexldlt=0.67, C-indexddlt=0.74) outperformed the traditional Cox model (C-indexldlt=0.57, C-indexddlt=0.65). The predicted 10-year mean survival gain of LDLT over DDLT was 10.3% (SD = 5.7%). Particularly, PSC (12.4±5.3%) and HCV (12.1±4.7%) had the highest survival benefits from LDLT compared to other etiologies.

Conclusions

DPSM provides an effective approach for creating RCT-like comparability from observational data to predict which patients will benefit most from LDLT. This novel ML-based methodology enables personalized survival predictions while minimizing confounders and offers clinicians a new tool to more confidently evaluate treatment effects.
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来源期刊
Journal of Hepatology
Journal of Hepatology 医学-胃肠肝病学
CiteScore
46.10
自引率
4.30%
发文量
2325
审稿时长
30 days
期刊介绍: The Journal of Hepatology is the official publication of the European Association for the Study of the Liver (EASL). It is dedicated to presenting clinical and basic research in the field of hepatology through original papers, reviews, case reports, and letters to the Editor. The Journal is published in English and may consider supplements that pass an editorial review.
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