无约束环境下鸟类头部运动的自动分析:始祖恐龙半规管进化的基础研究。

IF 3.5 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Journal of The Royal Society Interface Pub Date : 2025-05-01 Epub Date: 2025-05-28 DOI:10.1098/rsif.2024.0919
Marco Santos-Lopes, Ricardo Araújo, Romain David, Paulo L Correia
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引用次数: 0

摘要

这项研究提出了一个框架来自动分析鸟类的头部运动从视频的自然行为。这个过程包括探测鸟类,识别它们头上的关键点,并跟踪它们的位置随时间的变化。鸟类检测和关键点提取是在公开可用的数据集上进行训练的,这些数据集包括各种鸟类在非受控环境下的视频和图像。通过验证、细化、滤波和平滑,解决了复杂视频背景导致误识别和关键点不准确的初始挑战。根据改进后的关键点计算头部角速度和旋转频率。该算法在中等速度下表现良好,但受限于大多数视频的30 Hz帧率,这限制了可测量的角速度和频率,并造成运动模糊,影响关键点检测。我们的研究结果表明,该框架可以提供头部运动的合理估计,但也强调了高帧率视频在未来研究中的重要性,包括与地面真实数据的广泛比较,以充分表征鸟类头部运动。重要的是,这项工作是了解已灭绝和现存四足动物半规管进化驱动因素的基础努力,半规管是监测头部旋转的生物传感器。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Automated analysis of bird head motion in unconstrained settings: a foundational study on semicircular canal evolution in archosaurs.

This study presents a framework to automatically analyse head motion in birds from videos of natural behaviours. The process involves detecting birds, identifying key points on their heads and tracking changes in their positions over time. Bird detection and key point extraction were trained on publicly available datasets, featuring videos and images of diverse bird species in uncontrolled settings. Initial challenges with complex video backgrounds causing misidentifications and inaccurate key points were addressed through validation, refinement, filtering and smoothing. Head angular velocities and rotation frequencies were computed from the refined key points. The algorithm performed well at moderate speeds but was limited by the 30 Hz frame rate of most videos, which constrained measurable angular velocities and frequencies and caused motion blur, affecting key point detection. Our findings suggest that the framework may provide plausible estimates of head motion but also emphasize the importance of high frame-rate videos in future research, including extensive comparisons against ground truth data, to fully characterize bird head movements. Importantly, this work is a foundational effort to understand the evolutionary drivers of the semicircular canals, the biosensor that monitors head rotations, for both extinct and extant tetrapods.

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来源期刊
Journal of The Royal Society Interface
Journal of The Royal Society Interface 综合性期刊-综合性期刊
CiteScore
7.10
自引率
2.60%
发文量
234
审稿时长
2.5 months
期刊介绍: J. R. Soc. Interface welcomes articles of high quality research at the interface of the physical and life sciences. It provides a high-quality forum to publish rapidly and interact across this boundary in two main ways: J. R. Soc. Interface publishes research applying chemistry, engineering, materials science, mathematics and physics to the biological and medical sciences; it also highlights discoveries in the life sciences of relevance to the physical sciences. Both sides of the interface are considered equally and it is one of the only journals to cover this exciting new territory. J. R. Soc. Interface welcomes contributions on a diverse range of topics, including but not limited to; biocomplexity, bioengineering, bioinformatics, biomaterials, biomechanics, bionanoscience, biophysics, chemical biology, computer science (as applied to the life sciences), medical physics, synthetic biology, systems biology, theoretical biology and tissue engineering.
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