弗雷德里克格里菲斯的转化实验II:包含细胞遗传的创造新的微生物。

IF 3.8 3区 医学 Q2 ENGINEERING, BIOMEDICAL
Günter A Müller
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引用次数: 0

摘要

到目前为止,构建人工微生物的合成生物学方法已经培养了受体细胞与供体细胞基因组的转化。然而,这种策略似乎仅限于密切相关的细菌物种,因为需要供体和受体蛋白质组和结构之间的“契合”。“拟合”供体和受体细胞之间代谢物通量和转换的细胞调节,即控制论遗传,可能更难实现。由Frederick Griffith在近一个世纪前引入的细菌转化实验设计1.0可能支持DNA、大分子、拓扑、控制论和细胞遗传的整合:(i) (S)血清型供体肺炎球菌的衰减促进DNA的释放,并且假设非DNA结构与随后转移到(R)到(S)血清型的受体肺炎球菌相兼容;(ii)使用完整的供体细胞,而不是亚细胞或纯化的部分,可以保证转移的结构和控制论物质和信息的最大多样性;(3)供体和受体肺炎球菌的“混合”或混合和融合可能在代谢物和调节回路的伴随转移下发生。本文提出了格里菲斯转化实验设计2.0,该设计可以实现DNA以及非DNA结构和控制论物质和信息的有效交换,从而产生与先前细胞相比具有较大形态/代谢表型差异和主要特征的单细胞杂交微生物。本文简要回顾了水平基因和体细胞核转移的先决条件、转化的分子机制、细菌细胞骨架的生物发生机制、胶束样复合物和膜景观,并根据基本概念,从达尔文的“双胞体”到“stirps”、细胞质和“等离子体”遗传、“根茎代理”、“传播学”、“跨学科膜学”到克什纳的“促进变异”。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The Transformation Experiment of Frederick Griffith II: Inclusion of Cellular Heredity for the Creation of Novel Microorganisms.

So far, synthetic biology approaches for the construction of artificial microorganisms have fostered the transformation of acceptor cells with genomes from donor cells. However, this strategy seems to be limited to closely related bacterial species only, due to the need for a "fit" between donor and acceptor proteomes and structures. "Fitting" of cellular regulation of metabolite fluxes and turnover between donor and acceptor cells, i.e. cybernetic heredity, may be even more difficult to achieve. The bacterial transformation experiment design 1.0, as introduced by Frederick Griffith almost one century ago, may support integration of DNA, macromolecular, topological, cybernetic and cellular heredity: (i) attenuation of donor Pneumococci of (S) serotype fosters release of DNA, and hypothetically of non-DNA structures compatible with subsequent transfer to and transformation of acceptor Pneumococci from (R) to (S) serotype; (ii) use of intact donor cells rather than of subcellular or purified fractions may guarantee maximal diversity of the structural and cybernetic matter and information transferred; (iii) "Blending" or mixing and fusion of donor and acceptor Pneumococci may occur under accompanying transfer of metabolites and regulatory circuits. A Griffith transformation experiment design 2.0 is suggested, which may enable efficient exchange of DNA as well as non-DNA structural and cybernetic matter and information, leading to unicellular hybrid microorganisms with large morphological/metabolic phenotypic differences and major features compared to predeceding cells. The prerequisites of horizontal gene and somatic cell nuclear transfer, the molecular mechanism of transformation, the machineries for the biogenesis of bacterial cytoskeleton, micelle-like complexes and membrane landscapes are briefly reviewed on the basis of underlying conceptions, ranging from Darwin's "gemmules" to "stirps", cytoplasmic and "plasmon" inheritance, "rhizene agency", "communicology", "transdisciplinary membranology" to up to Kirschner's "facilitated variation".

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来源期刊
Bioengineering
Bioengineering Chemical Engineering-Bioengineering
CiteScore
4.00
自引率
8.70%
发文量
661
期刊介绍: Aims Bioengineering (ISSN 2306-5354) provides an advanced forum for the science and technology of bioengineering. It publishes original research papers, comprehensive reviews, communications and case reports. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. All aspects of bioengineering are welcomed from theoretical concepts to education and applications. There is no restriction on the length of the papers. The full experimental details must be provided so that the results can be reproduced. There are, in addition, four key features of this Journal: ● We are introducing a new concept in scientific and technical publications “The Translational Case Report in Bioengineering”. It is a descriptive explanatory analysis of a transformative or translational event. Understanding that the goal of bioengineering scholarship is to advance towards a transformative or clinical solution to an identified transformative/clinical need, the translational case report is used to explore causation in order to find underlying principles that may guide other similar transformative/translational undertakings. ● Manuscripts regarding research proposals and research ideas will be particularly welcomed. ● Electronic files and software regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material. ● We also accept manuscripts communicating to a broader audience with regard to research projects financed with public funds. Scope ● Bionics and biological cybernetics: implantology; bio–abio interfaces ● Bioelectronics: wearable electronics; implantable electronics; “more than Moore” electronics; bioelectronics devices ● Bioprocess and biosystems engineering and applications: bioprocess design; biocatalysis; bioseparation and bioreactors; bioinformatics; bioenergy; etc. ● Biomolecular, cellular and tissue engineering and applications: tissue engineering; chromosome engineering; embryo engineering; cellular, molecular and synthetic biology; metabolic engineering; bio-nanotechnology; micro/nano technologies; genetic engineering; transgenic technology ● Biomedical engineering and applications: biomechatronics; biomedical electronics; biomechanics; biomaterials; biomimetics; biomedical diagnostics; biomedical therapy; biomedical devices; sensors and circuits; biomedical imaging and medical information systems; implants and regenerative medicine; neurotechnology; clinical engineering; rehabilitation engineering ● Biochemical engineering and applications: metabolic pathway engineering; modeling and simulation ● Translational bioengineering
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