带有残差编码器的三维nnU-Net在2024 MICCAI头颈部肿瘤分割挑战赛中的应用。

Kaiyuan Ji, Zhihan Wu, Jing Han, Jun Jia, Guangtao Zhai, Jiannan Liu
{"title":"带有残差编码器的三维nnU-Net在2024 MICCAI头颈部肿瘤分割挑战赛中的应用。","authors":"Kaiyuan Ji, Zhihan Wu, Jing Han, Jun Jia, Guangtao Zhai, Jiannan Liu","doi":"10.1007/978-3-031-83274-1_20","DOIUrl":null,"url":null,"abstract":"<p><p>This article explores the potential of deep learning technologies for the automated identification and delineation of primary tumor volumes (GTVp) and metastatic lymph nodes (GTVn) in radiation therapy planning, specifically using MRI data. Utilizing the high-quality dataset provided by the 2024 MICCAI Head and Neck Tumor Segmentation Challenge, this study employs the 3DnnU-Net model for automatic tumor segmentation. Our experiments revealed that the model performs poorly with high background ratios, which prompted a retraining with selected data of specific background ratios to improve segmentation performance. The results demonstrate that the model performs well on data with low background ratios, but optimization is still needed for high background ratios. Additionally, the model shows better performance in segmenting GTVn compared to GTVp, with DSCagg scores of 0.6381 and 0.8064 for Task 1 and Task 2, respectively, during the final test phase. Future work will focus on optimizing the model and adjusting the network architecture, aiming to enhance the segmentation of GTVp while maintaining the effectiveness of GTVn segmentation to increase accuracy and reliability in clinical applications.</p>","PeriodicalId":520475,"journal":{"name":"Head and Neck Tumor Segmentation for MR-Guided Applications : First MICCAI Challenge, HNTS-MRG 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 17, 2024, proceedings","volume":"15273 ","pages":"250-258"},"PeriodicalIF":0.0000,"publicationDate":"2025-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12097725/pdf/","citationCount":"0","resultStr":"{\"title\":\"Application of 3D nnU-Net with Residual Encoder in the 2024 MICCAI Head and Neck Tumor Segmentation Challenge.\",\"authors\":\"Kaiyuan Ji, Zhihan Wu, Jing Han, Jun Jia, Guangtao Zhai, Jiannan Liu\",\"doi\":\"10.1007/978-3-031-83274-1_20\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>This article explores the potential of deep learning technologies for the automated identification and delineation of primary tumor volumes (GTVp) and metastatic lymph nodes (GTVn) in radiation therapy planning, specifically using MRI data. Utilizing the high-quality dataset provided by the 2024 MICCAI Head and Neck Tumor Segmentation Challenge, this study employs the 3DnnU-Net model for automatic tumor segmentation. Our experiments revealed that the model performs poorly with high background ratios, which prompted a retraining with selected data of specific background ratios to improve segmentation performance. The results demonstrate that the model performs well on data with low background ratios, but optimization is still needed for high background ratios. Additionally, the model shows better performance in segmenting GTVn compared to GTVp, with DSCagg scores of 0.6381 and 0.8064 for Task 1 and Task 2, respectively, during the final test phase. Future work will focus on optimizing the model and adjusting the network architecture, aiming to enhance the segmentation of GTVp while maintaining the effectiveness of GTVn segmentation to increase accuracy and reliability in clinical applications.</p>\",\"PeriodicalId\":520475,\"journal\":{\"name\":\"Head and Neck Tumor Segmentation for MR-Guided Applications : First MICCAI Challenge, HNTS-MRG 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 17, 2024, proceedings\",\"volume\":\"15273 \",\"pages\":\"250-258\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2025-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12097725/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Head and Neck Tumor Segmentation for MR-Guided Applications : First MICCAI Challenge, HNTS-MRG 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 17, 2024, proceedings\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/978-3-031-83274-1_20\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2025/3/3 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Head and Neck Tumor Segmentation for MR-Guided Applications : First MICCAI Challenge, HNTS-MRG 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 17, 2024, proceedings","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/978-3-031-83274-1_20","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/3/3 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

本文探讨了深度学习技术在放射治疗计划中自动识别和描述原发性肿瘤体积(GTVp)和转移性淋巴结(GTVn)方面的潜力,特别是使用MRI数据。本研究利用2024 MICCAI头颈部肿瘤分割挑战赛提供的高质量数据集,采用3DnnU-Net模型进行肿瘤自动分割。我们的实验表明,该模型在高背景比下表现不佳,这促使我们选择特定背景比的数据进行再训练,以提高分割性能。结果表明,该模型在低背景比下表现良好,但在高背景比下仍需优化。此外,与GTVp相比,该模型在分割GTVn方面表现出更好的性能,在最后的测试阶段,Task 1和Task 2的DSCagg得分分别为0.6381和0.8064。未来的工作将集中在优化模型和调整网络架构上,旨在增强GTVp的分割,同时保持GTVn分割的有效性,以提高临床应用的准确性和可靠性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Application of 3D nnU-Net with Residual Encoder in the 2024 MICCAI Head and Neck Tumor Segmentation Challenge.

This article explores the potential of deep learning technologies for the automated identification and delineation of primary tumor volumes (GTVp) and metastatic lymph nodes (GTVn) in radiation therapy planning, specifically using MRI data. Utilizing the high-quality dataset provided by the 2024 MICCAI Head and Neck Tumor Segmentation Challenge, this study employs the 3DnnU-Net model for automatic tumor segmentation. Our experiments revealed that the model performs poorly with high background ratios, which prompted a retraining with selected data of specific background ratios to improve segmentation performance. The results demonstrate that the model performs well on data with low background ratios, but optimization is still needed for high background ratios. Additionally, the model shows better performance in segmenting GTVn compared to GTVp, with DSCagg scores of 0.6381 and 0.8064 for Task 1 and Task 2, respectively, during the final test phase. Future work will focus on optimizing the model and adjusting the network architecture, aiming to enhance the segmentation of GTVp while maintaining the effectiveness of GTVn segmentation to increase accuracy and reliability in clinical applications.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信