Xinru Xiao, Wenwen Guo, Na Li, Nuo Chen, Qian Zhang
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Transcriptomic sequencing was performed on peripheral blood mononuclear cells from COPD patients with varying KL-6 levels to explore underlying biological mechanisms. A Mendelian randomization analysis was employed to ascertain the association between the expression quantitative trait loci of key genes and emphysema risk.</p><p><strong>Results: </strong>Serum KL-6 levels were significantly elevated in COPD patients, particularly in COPD-E. Pearson analyses revealed that the serum KL-6 concentration was positively correlated with eosinophil count. Transcriptomic analysis revealed 237 differentially expressed genes (DEGs) between patients with high and low levels of KL-6. Gene set enrichment analysis revealed that these DEGs were associated with immune responses. No significant difference in immune cell proportions were observed between high and low KL-6 groups, but KL-6 showed a negative correlation with T cell gamma delta. By intersecting the DEGs with those from the GSE248493 dataset, we identified seven key genes and further validated their association with the risk of emphysema using Mendelian randomization, with amidohydrolase domain containing 2 (AMDHD2) potentially reducing the risk of the disease.</p><p><strong>Conclusion: </strong>KL-6 is a promising biomarker for distinguishing COPD-E from COPD-NE and AMDHD2 may be involved in the regulation of increased KL-6 levels in COPD-E.</p>","PeriodicalId":16107,"journal":{"name":"Journal of Inflammation Research","volume":"18 ","pages":"6453-6466"},"PeriodicalIF":4.2000,"publicationDate":"2025-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12103879/pdf/","citationCount":"0","resultStr":"{\"title\":\"Identifying KL-6-Associated Immune Cell Signatures and Key Genes in Emphysematous COPD.\",\"authors\":\"Xinru Xiao, Wenwen Guo, Na Li, Nuo Chen, Qian Zhang\",\"doi\":\"10.2147/JIR.S515653\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>This study aimed to evaluate the potential of Krebs von den lungen-6 (KL-6) as a biomarker for distinguishing emphysematous chronic obstructive pulmonary disease (COPD-E) from non-emphysematous COPD (COPD-NE), and to explore the underlying mechanisms associated with KL-6 expression.</p><p><strong>Methods: </strong>We enrolled 154 patients with COPD and 170 healthy controls to assess serum KL-6 levels. Receiver operating characteristic curve was used to determine the diagnostic sensitivity and specificity. Pearson's correlation analysis was used to evaluate the correlation. Univariate and multivariate linear regression analyses were performed to explore the factors influencing KL-6 levels in COPD. Transcriptomic sequencing was performed on peripheral blood mononuclear cells from COPD patients with varying KL-6 levels to explore underlying biological mechanisms. A Mendelian randomization analysis was employed to ascertain the association between the expression quantitative trait loci of key genes and emphysema risk.</p><p><strong>Results: </strong>Serum KL-6 levels were significantly elevated in COPD patients, particularly in COPD-E. Pearson analyses revealed that the serum KL-6 concentration was positively correlated with eosinophil count. Transcriptomic analysis revealed 237 differentially expressed genes (DEGs) between patients with high and low levels of KL-6. 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引用次数: 0
摘要
背景:本研究旨在评估肺Krebs von den -6 (KL-6)作为区分肺气肿性慢性阻塞性肺疾病(COPD- e)和非肺气肿性COPD (COPD- ne)的生物标志物的潜力,并探讨KL-6表达的潜在机制。方法:我们招募了154例COPD患者和170名健康对照者来评估血清KL-6水平。采用受试者工作特征曲线确定诊断敏感性和特异性。采用Pearson相关分析评价相关性。通过单因素和多因素线性回归分析,探讨COPD患者KL-6水平的影响因素。对不同KL-6水平的COPD患者外周血单个核细胞进行转录组测序,以探索潜在的生物学机制。采用孟德尔随机化分析确定关键基因数量性状位点的表达与肺气肿风险之间的关系。结果:COPD患者血清KL-6水平显著升高,尤其是COPD- e患者。Pearson分析显示血清KL-6浓度与嗜酸性粒细胞计数呈正相关。转录组学分析显示,高水平和低水平KL-6患者之间存在237个差异表达基因(DEGs)。基因集富集分析显示,这些deg与免疫应答有关。高、低KL-6组免疫细胞比例无显著差异,但KL-6与T细胞γ δ呈负相关。通过将deg与来自GSE248493数据集的deg交叉,我们确定了7个关键基因,并使用孟德尔随机化进一步验证了它们与肺气肿风险的关联,其中含有2的氨基水解酶结构域(AMDHD2)可能降低该疾病的风险。结论:KL-6是鉴别COPD-E和COPD-NE的生物标志物,AMDHD2可能参与了COPD-E中KL-6水平升高的调控。
Identifying KL-6-Associated Immune Cell Signatures and Key Genes in Emphysematous COPD.
Background: This study aimed to evaluate the potential of Krebs von den lungen-6 (KL-6) as a biomarker for distinguishing emphysematous chronic obstructive pulmonary disease (COPD-E) from non-emphysematous COPD (COPD-NE), and to explore the underlying mechanisms associated with KL-6 expression.
Methods: We enrolled 154 patients with COPD and 170 healthy controls to assess serum KL-6 levels. Receiver operating characteristic curve was used to determine the diagnostic sensitivity and specificity. Pearson's correlation analysis was used to evaluate the correlation. Univariate and multivariate linear regression analyses were performed to explore the factors influencing KL-6 levels in COPD. Transcriptomic sequencing was performed on peripheral blood mononuclear cells from COPD patients with varying KL-6 levels to explore underlying biological mechanisms. A Mendelian randomization analysis was employed to ascertain the association between the expression quantitative trait loci of key genes and emphysema risk.
Results: Serum KL-6 levels were significantly elevated in COPD patients, particularly in COPD-E. Pearson analyses revealed that the serum KL-6 concentration was positively correlated with eosinophil count. Transcriptomic analysis revealed 237 differentially expressed genes (DEGs) between patients with high and low levels of KL-6. Gene set enrichment analysis revealed that these DEGs were associated with immune responses. No significant difference in immune cell proportions were observed between high and low KL-6 groups, but KL-6 showed a negative correlation with T cell gamma delta. By intersecting the DEGs with those from the GSE248493 dataset, we identified seven key genes and further validated their association with the risk of emphysema using Mendelian randomization, with amidohydrolase domain containing 2 (AMDHD2) potentially reducing the risk of the disease.
Conclusion: KL-6 is a promising biomarker for distinguishing COPD-E from COPD-NE and AMDHD2 may be involved in the regulation of increased KL-6 levels in COPD-E.
期刊介绍:
An international, peer-reviewed, open access, online journal that welcomes laboratory and clinical findings on the molecular basis, cell biology and pharmacology of inflammation.