肝细胞癌panoposis相关LncRNA预后特征的构建及AC034229.4的功能分析

IF 3.5 4区 医学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Rui He, Ningning Wang, Xiujuan Zheng, Baiming Jin, Xuying Li, Mingqi Li, Shijing Nian, Kewei Wang
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引用次数: 0

摘要

目的:本研究旨在建立PANoptosis相关的预后特征,并确定HCC的潜在预后标志物和治疗靶点。背景:肝细胞癌是世界范围内最常见的恶性肿瘤之一。HCC患者的生存率仍然相对较低。PANoptosis可通过lncRNA介导参与HCC的病理生理,但其机制尚不清楚。目的:利用TCGA和GEO肝癌数据库及既往研究成果构建PANoptosis相关风险模型。方法:基于肿瘤基因组图谱(Cancer Genome Atlas, TCGA)和基因表达图谱(Gene Expression Omnibus, GEO)数据库,本研究鉴定出与肝癌PANoptosis相关的长链非编码rna (lncRNAs)。采用单因素、LASSO-Cox和多因素COX分析逐步筛选预后lncrna并构建预后模型。对核心lncRNA-AC034229.4进行进一步分析。结果:共发现8个与HCC预后密切相关的差异表达lncrna。建立了由6个lncrna (AC090192.2、LINC01703、AC034229.4、AC073352.1、AC004816.1、AL136162.1)组成的预后模型,对预后具有较好的预测能力。此外,该预后模型与肿瘤免疫微环境和免疫检查点密切相关。随后的研究表明,AC034229.4通过调节细胞周期进程和抑制免疫微环境反应来独立影响HCC预后。药物敏感性分析表明,AC034229 .4对多种抗癌药物均有敏感性。此外,抑制ac034229.4的表达可抑制HCC的迁移和侵袭能力。结论:本研究建立了一种新颖有效的预后特征模型,并确定ac034229.4是一种有前景的HCC诊断和预后生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Construction of PANoptosis-related LncRNA Prognostic Signature and Functional Analysis of AC034229.4 in Hepatocellular Carcinoma.

Aims: This study aimed to establish a PANoptosis related prognostic signature and identify potential prognostic markers and therapeutic targets for HCC.

Background: Hepatocellular carcinoma (HCC) is one of the most common malignant tumors worldwide. The survival rate of patients with HCC remains relatively low. PANoptosis can be mediated by lncRNA to involve the pathophysiology of HCC, but the mechanism is still unclear.

Objective: TCGA and GEO hepatocellular carcinoma databases and previous research results were used to construct the PANoptosis related risk model.

Method: Based on the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) database, this study identified long non-coding RNAs (lncRNAs) associated with PANoptosis in HCC. Univariate, LASSO-Cox, and multivariate COX analyses were employed to gradually screen prognostic lncRNAs and construct prognostic models. Further analysis was conducted on the core lncRNA-AC034229.4.

Result: A total of 8 differentially expressed lncRNAs closely correlated with HCC prognosis were discovered. A prognostic model comprising 6 lncRNAs (AC090192.2, LINC01703, AC034229.4, AC073352.1, AC004816.1, and AL136162.1) was established demonstrating good predictive ability for prognosis. Moreover, this prognostic model exhibited close associations with tumor immune microenvironment and immune checkpoints. Subsequent investigations revealed that AC034229.4 independently influenced HCC prognosis by regulating cell cycle progression and inhibiting the immune microenvironment response. Drug sensitivity analysis indicated that AC034229 .4 displayed sensitivity to various anticancer drugs as well. In addition, inhibition of AC034229 .4 expression suppressed HCC migration and invasion abilities.

Conclusion: This study generated a novel and efficient prognostic signature model while identifying AC034229 .4 as a promising diagnostic and prognostic biomarker in HCC.

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来源期刊
Current medicinal chemistry
Current medicinal chemistry 医学-生化与分子生物学
CiteScore
8.60
自引率
2.40%
发文量
468
审稿时长
3 months
期刊介绍: Aims & Scope Current Medicinal Chemistry covers all the latest and outstanding developments in medicinal chemistry and rational drug design. Each issue contains a series of timely in-depth reviews and guest edited thematic issues written by leaders in the field covering a range of the current topics in medicinal chemistry. The journal also publishes reviews on recent patents. Current Medicinal Chemistry is an essential journal for every medicinal chemist who wishes to be kept informed and up-to-date with the latest and most important developments.
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