[基于公共数据库的研究探讨DDB1
在肺腺癌中的表达及其作用]。

Q4 Medicine
Xinkai Zou, Ziyi He, Yanfei Zhang, Yi Hu, Xiaomin Wang, Zhongjie Wu
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引用次数: 0

摘要

背景:肺腺癌(LUAD)是非小细胞肺癌(NSCLC)的主要亚型。损伤特异性DNA结合蛋白1 (DDB1)是CUL4-DDB1泛素连接酶复合物的核心蛋白,参与DNA损伤修复、表观遗传修饰和细胞周期检查点激活的调控。虽然已经报道了DDB1通过DNA修复和RNA转录调控参与肿瘤进展,但其在LUAD中的表达和作用仍有待阐明。本研究旨在探讨DDB1在LUAD中的表达及其作用。方法:采用UALCAN、Kaplan-Meier Plotter、GEPIA等数据库分析DDB1在LUAD中的表达、临床病理特征及预后;通过GeneMANIA和metscape构建了相互作用网络和丰富的功能通路;结合TISIDB浸润评价DDB1与免疫细胞的相关性,通过单细胞测序分析细胞亚型聚类结果及DDB1在不同免疫细胞亚群中的表达;最后,利用组织芯片进一步验证DDB1在LUAD中的表达及其预后价值。结果:DDB1 mRNA和蛋白在LUAD组织中的表达明显高于正常组织(p结论:DDB1在LUAD中高表达,与预后不良相关,且与肿瘤免疫细胞浸润密切相关,并通过DNA修复和RNA转录调控参与肿瘤的发生发展。DDB1可作为LUAD的潜在预后标志物和治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[Public Database-based Study to Explore the Expression and Role of DDB1 
in Lung Adenocarcinoma].

Background: Lung adenocarcinoma (LUAD) is the predominant subtype of non-small cell lung cancer (NSCLC). Damage-specific DNA binding protein 1 (DDB1), as a core protein of the CUL4-DDB1 ubiquitin ligase complex, is involved in the regulation of DNA damage repair, epigenetic modification, and cell cycle checkpoint activation. While the involvement of DDB1 in tumour progression through DNA repair and RNA transcriptional regulation has been reported, its expression and role in LUAD remain to be elucidated. This study aims to investigate the expression and role of DDB1 in LUAD.

Methods: The expression, clinicopathological features and prognosis of DDB1 in LUAD were analysed using databases such as UALCAN, Kaplan-Meier Plotter and GEPIA; The interaction network and enriched functional pathways were constructed by GeneMANIA and Metascape; the correlation between DDB1 and immune cells by combining with TISIDB infiltration was evaluated, and the clustering results of cell subtypes and the expression of DDB1 in different immune cell subpopulations were analysed by single-cell sequencing; finally, tissue microarrays were used to further verify the expression and prognostic value of DDB1 in LUAD.

Results: The mRNA and protein expression of DDB1 in LUAD tissues were significantly higher than those in normal tissues (P<0.01), and the high expression correlated with later clinical stage (P<0.001), lymph node metastasis (P<0.001) and poor prognosis (P<0.001). Functional enrichment showed that DDB1 was involved in DNA repair and RNA transcriptional regulation, and TISIDB evaluation revealed that DDB1 was negatively correlated with the expression level of immune cells, suggesting the potential regulation of the immune microenvironment. Single cell analysis showed that DDB1 was mainly expressed in T cells, alveolar macrophages and dendritic cells. Tissue microarrays confirmed that overall survival was shorter in the DDB1 high expression group (P<0.001), and Cox multifactorial analysis showed that DDB1 was an independent predictor of LUAD prognosis.

Conclusions: DDB1 is highly expressed in LUAD, which is associated with poor prognosis, and is closely related to tumor immune cell infiltration, and is involved in tumourigenesis and development through DNA repair and RNA transcriptional regulation. DDB1 can be used as a potential prognostic marker and therapeutic target for LUAD.

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来源期刊
中国肺癌杂志
中国肺癌杂志 Medicine-Pulmonary and Respiratory Medicine
CiteScore
1.40
自引率
0.00%
发文量
5131
审稿时长
14 weeks
期刊介绍: Chinese Journal of Lung Cancer(CJLC, pISSN 1009-3419, eISSN 1999-6187), a monthly Open Access journal, is hosted by Chinese Anti-Cancer Association, Chinese Antituberculosis Association, Tianjin Medical University General Hospital. CJLC was indexed in DOAJ, EMBASE/SCOPUS, Chemical Abstract(CA), CSA-Biological Science, HINARI, EBSCO-CINAHL,CABI Abstract, Global Health, CNKI, etc. Editor-in-Chief: Professor Qinghua ZHOU.
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