利用CLIMB数据库分析bart Health NHS Trust医院收治的COVID-19患者的变异动态

IF 6.8 3区 医学 Q1 VIROLOGY
Concetta Piazzese, Sophie Williams, Adam Brentall, Beatrix Kele, Jon Bible, Kathryn Harris, Teresa Cutino-Moguel
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引用次数: 0

摘要

由SARS-CoV-2引起的COVID-19大流行导致了重大的全球卫生挑战。本研究使用来自CLIMB-COVID分散数字基础设施的数据,分析了bart Health National Health Service (NHS)信托医院收治的患者中SARS-CoV-2变体的动态,该基础设施可以精确识别SARS-CoV-2变体。在2020年10月至2021年3月期间,共有423名患者被纳入该研究,并被分为两组:alpha谱系组,包括B.1.1.7变异,以及其他谱系组,包括所有其他变异。利用COVID-CLIMB管道对SARS-CoV-2基因组进行全基因组测序。对28天内的死亡率和病情恶化等临床结果进行分析。为了确保研究结果的可靠性,对包括年龄和合并症在内的混杂因素进行了调整。我们的研究结果显示,随着年龄的增长,α谱系和其他谱系的死亡率显著增加。该研究强调了临床研究中年龄调整的重要性,以准确评估不同变异的影响。一致的基因组测序和数据完整性对于获得可靠的结果和指导公共卫生对策至关重要。这些见解对于改善患者的治疗结果和提供大流行的真实情况,为当前和未来的卫生保健战略提供信息至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Analysis of Variants' Dynamic Using the CLIMB Database in COVID-19 Patients Admitted to Hospitals of Barts Health NHS Trust

The COVID-19 pandemic, caused by SARS-CoV-2, has led to significant global health challenges. This study analyzes the dynamics of SARS-CoV-2 variants among patients admitted to Barts Health National Health Service (NHS) Trust hospitals using data from the CLIMB-COVID decentralized digital infrastructure allowing precise identification of SARS-CoV-2 variants. A total of 423 patients admitted between October 2020 and March 2021 were included in the study and divided into two groups: the alpha lineage group, which comprised the B.1.1.7 variant, and the other lineages group, which included all other variants. Whole-genome sequencing of SARS-CoV-2 genomes was conducted using the COVID-CLIMB pipelines. Clinical outcomes, such as mortality rates and deterioration within 28 days, were analyzed. To ensure robust findings, analyzes were adjusted for confounding factors, including age and comorbidities. Our findings revealed a significant increase in mortality with age for the alpha lineage and other lineages. The study underscores the importance of age adjustment in clinical studies to accurately assess the impact of different variants. Consistent genomic sequencing and data completeness are crucial for obtaining reliable results and guiding public health responses. These insights are vital for improving patient outcomes and providing a truthful picture of the pandemic, informing both current and future healthcare strategies.

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来源期刊
Journal of Medical Virology
Journal of Medical Virology 医学-病毒学
CiteScore
23.20
自引率
2.40%
发文量
777
审稿时长
1 months
期刊介绍: The Journal of Medical Virology focuses on publishing original scientific papers on both basic and applied research related to viruses that affect humans. The journal publishes reports covering a wide range of topics, including the characterization, diagnosis, epidemiology, immunology, and pathogenesis of human virus infections. It also includes studies on virus morphology, genetics, replication, and interactions with host cells. The intended readership of the journal includes virologists, microbiologists, immunologists, infectious disease specialists, diagnostic laboratory technologists, epidemiologists, hematologists, and cell biologists. The Journal of Medical Virology is indexed and abstracted in various databases, including Abstracts in Anthropology (Sage), CABI, AgBiotech News & Information, National Agricultural Library, Biological Abstracts, Embase, Global Health, Web of Science, Veterinary Bulletin, and others.
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