宏基因组学：基于k-mer的新方法

IF 103.3 1区生物学 Q1 MICROBIOLOGY

Nature Reviews Microbiology Pub Date : 2025-05-23 DOI:10.1038/s41579-025-01192-9

Timothy J. Rozday

引用次数: 0

摘要

本基因组观察强调了k-mer方法与基于标准比对的方法在分析宏基因组数据、协助微生物物种鉴定、微生物丰度估计及其在病原体基因组流行病学中的应用方面的优势和局限性。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

Metagenomics distilled: new k-mer-based methods

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Metagenomics distilled: new k-mer-based methods

This Genome Watch highlights the advantages and limitations of k-mer approaches versus standard alignment-based methods for analysing metagenomic data, assisting microbial species identification, microbial abundance estimation and their application in pathogen genomic epidemiology.

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来源期刊

Nature Reviews Microbiology 生物-微生物学

CiteScore

74.00

自引率

0.50%

发文量

149

审稿时长

6-12 weeks

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