结合机器学习和分子对接,破解黄曲霉毒素b1诱导肝癌的分子网络。

IF 12.5 2区 医学 Q1 SURGERY
Junjie Gao, Meijun Zhang, Qun Chen, Kai Ye, Jing Wu, Tao Wang, Puhong Zhang, Gang Feng
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引用次数: 0

摘要

目的:探讨黄曲霉毒素B1 (AFB1)诱发肝细胞癌(HCC)的分子机制。方法:对多个数据集进行差异表达分析,鉴定hcc相关靶基因。结合机器学习算法、网络毒理学和分子对接技术,探索AFB1与靶蛋白之间的结合相互作用。结果:共有48个基因被确定为afb1诱导肝癌发生的潜在靶点。随后的机器学习分析将6个核心基因(RND3、PCK1、AURKA、BCAT2、UCK2和CCNB1)作为关键调控因子进行了优先排序。其中RND3、PCK1显著下调,AURKA、BCAT2、UCK2、CCNB1显著上调(结论:本研究提示AFB1可能通过靶向特定基因和信号通路促进HCC发病。机器学习鉴定出6个核心调控基因,分子对接证实了AFB1与关键靶点的高结合亲和力。这些发现为进一步探索afb1诱导肝癌发生的机制提供了重要的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrating machine learning and molecular docking to decipher the molecular network of aflatoxin b1-induced hepatocellular carcinoma.

Objective: This study aims to investigate the molecular mechanisms underlying hepatocellular carcinoma (HCC) induced by Aflatoxin B1 (AFB1).

Methods: Differential expression analysis of multiple datasets was performed to identify HCC-related target genes. Machine learning algorithms, network toxicology, and molecular docking techniques were integrated to explore the binding interactions between AFB1 and target proteins.

Results: A total of 48 genes were identified as potential targets for AFB1-induced hepatocarcinogenesis. Subsequent machine learning analysis prioritized six core genes (RND3, PCK1, AURKA, BCAT2, UCK2, and CCNB1) as key regulators. Among these, RND3 and PCK1 exhibited significant downregulation, while AURKA, BCAT2, UCK2 and CCNB1 showed marked upregulation (P<0.05). Molecular docking simulations revealed strong binding specificity between AFB1 and target proteins.

Conclusion: This study demonstrates that AFB1 may promote HCC pathogenesis by targeting specific genes and signaling pathways. Machine learning identified six core regulatory genes, and molecular docking confirmed AFB1's high binding affinity with key targets. These findings provide critical insights for further mechanistic exploration of AFB1-induced hepatocarcinogenesis.

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来源期刊
CiteScore
17.70
自引率
3.30%
发文量
0
审稿时长
6-12 weeks
期刊介绍: The International Journal of Surgery (IJS) has a broad scope, encompassing all surgical specialties. Its primary objective is to facilitate the exchange of crucial ideas and lines of thought between and across these specialties.By doing so, the journal aims to counter the growing trend of increasing sub-specialization, which can result in "tunnel-vision" and the isolation of significant surgical advancements within specific specialties.
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