探索肾素-血管紧张素系统基因作为口腔鳞状细胞癌新的预后生物标志物。

IF 3.2 3区 医学 Q1 MEDICINE, GENERAL & INTERNAL
International Journal of Medical Sciences Pub Date : 2025-04-28 eCollection Date: 2025-01-01 DOI:10.7150/ijms.112735
Zhengzheng Wu, Can Wang, Jiusong Han, Xiaobing Chen, Jie Wu, Bin Cheng, Juan Wang
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引用次数: 0

摘要

目的:最近的证据表明肾素-血管紧张素系统(RAS)参与了OSCC的发展。本研究旨在通过综合生物信息学分析,鉴定与OSCC预后相关的ras相关基因(RASRG)生物标志物。方法:首先,利用加权基因共表达网络分析(WGCNA)将TCGA-OSCC数据集中的差异表达基因(deg)与RASRGs相交,鉴定模块基因。其次,利用Cox和最小绝对收缩和选择算子(LASSO)回归分析构建OSCC风险模型。我们还创建了一个包含风险评分和相关临床变量的nomogram。随后,采用受试者工作特征(ROC)分析、Kaplan-Meier (KM)曲线分析、Cox回归分析和体外实验来评估预后风险模型和nomogram的准确性。此外,通过蛋白-蛋白相互作用(PPI)网络、免疫浸润分析和功能富集分析揭示oscc相关致病基因及其机制。结果:建立了由CMA1、CTSG、OLR1、SPP1、AQP1和PTX3 6个关键基因组成的新型OSCC风险模型。该六基因标记可有效预测OSCC患者的预后,并可作为可靠的独立预后参数。蛋白-蛋白相互作用网络分析鉴定出5个枢纽基因和13个mirna。免疫浸润分析提示RASRGs的预后特征可能与免疫调节有关。结论:在本研究中,我们成功构建了一个基于已确定的6种ras相关deg作为OSCC潜在预测生物标志物的风险模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring Renin-angiotensin System Genes as Novel Prognostic Biomarkers for Oral Squamous Cell Carcinoma.

Purpose: Recent evidence suggests that the renin-angiotensin system (RAS) is involved in OSCC development. This study aimed to identify RAS-related gene (RASRG) biomarkers associated with OSCC prognosis through integrated bioinformatics analysis. Methods: First, we identified module genes by intersecting differentially expressed genes (DEGs) from the TCGA-OSCC dataset with RASRGs using weighted gene co-expression network analysis (WGCNA). Next, Cox and least absolute shrinkage and selection operator (LASSO) regression analyses were utilized to construct an OSCC risk model. We also created a nomogram incorporating risk scores and relevant clinical variables. Subsequently, receiver operating characteristic (ROC) analysis, Kaplan-Meier (KM) curve analysis, Cox regression analysis, and in vitro experiments were performed to assess the accuracy of the prognostic risk model and nomogram. Furthermore, protein-protein interaction (PPI) network, immune infiltration analysis and functional enrichment analyses were employed to reveal OSCC-related pathogenic genes and underlying mechanisms. Results: A novel OSCC risk model was established consisting of six key genes: CMA1, CTSG, OLR1, SPP1, AQP1, and PTX3. This six-gene signature effectively predicted the prognosis of patients with OSCC and served as a reliable independent prognostic parameter. Protein-protein interaction network analysis identified 5 hub genes and 13 miRNAs. Immune infiltration analysis indicated a possible association of the prognostic features of RASRGs with immunomodulation. Conclusion: In this study, we successfully constructed a risk model based on the six identified RAS-related DEGs as potential predictive biomarkers for OSCC.

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来源期刊
International Journal of Medical Sciences
International Journal of Medical Sciences MEDICINE, GENERAL & INTERNAL-
CiteScore
7.20
自引率
0.00%
发文量
185
审稿时长
2.7 months
期刊介绍: Original research papers, reviews, and short research communications in any medical related area can be submitted to the Journal on the understanding that the work has not been published previously in whole or part and is not under consideration for publication elsewhere. Manuscripts in basic science and clinical medicine are both considered. There is no restriction on the length of research papers and reviews, although authors are encouraged to be concise. Short research communication is limited to be under 2500 words.
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