AUNIP是泛癌预后和免疫学的候选标志物。

IF 2.9 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
3 Biotech Pub Date : 2025-06-01 Epub Date: 2025-05-17 DOI:10.1007/s13205-025-04294-6
Xiaorong Guo, Ting Liu, Nan Li, Li Jin
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引用次数: 0

摘要

Aurora kinase A[Aurora-A]和9 -in相互作用蛋白)是调控DNA裂解最终状态的关键因子。据报道,AUNIP影响一些肿瘤的进展;然而,与AUNIP相关的分子功能尚不清楚。我们采用TCGA、GTEx、TIMER、GEPIA2、cBioportal、GSCALite等数据库对AUNIP基因表达、预后、基因变异及药物敏感性进行研究。采用Wilcoxon检验探讨AUNIP与临床病理信息的关系。采用Spearman相关分析分析AUNIP与TMB、MSI、免疫细胞浸润、免疫检查点的关系。我们利用GSEA研究了AUNIP在泛癌中的作用机制。此外,我们采用免疫组化(IHC)方法研究了AUNIP在肝细胞癌(LIHC)和正常组织中的表达差异。采用Chisq检验研究AUNIP与临床特征的相关性。在大多数肿瘤中,AUNIP高表达,免疫组化分析表明,LIHC中AUNIP的表达高于正常组织。AUNIP过表达在肾上腺皮质癌(ACC)、脑低级别胶质瘤(LGG)、LIHC、间皮瘤(MESO)和肉瘤(SARC)中有不良后果。此外,高AUNIP表达导致LIHC患者预后不良。在一些癌症中,AUNIP与T分期、N分期和临床病理分析相关,并且在IHC中,AUNIP的表达与LIHC的组织学分级相关。突变分析表明,在胆管癌(CHOL)中,AUNIP是基因改变频率最高的。AUNIP与30种抑制肿瘤发展的小分子药物呈负相关。AUNIP表达与各种肿瘤的TMB、MSI、免疫细胞浸润和免疫检查点有关。GSEA结果表明,AUNIP主要参与细胞周期、DNA复制、错配修复和同源重组。泛癌研究认为AUNIP是一种潜在的预后标志物和高潜伏性的诊断生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
AUNIP was a candidate marker for prognosis and immunology in pan-cancer.

AUNIP (Aurora kinase A[Aurora-A] and ninein-interacting protein), is a key factor regulating the end-state of DNA cleavage. It has been reported that AUNIP affects the progression of some tumors; however, the molecular functions involved in AUNIP remain unknown. We employed some databases, such as TCGA, GTEx, TIMER, GEPIA2, cBioportal, and GSCALite, to study AUNIP gene expression, prognosis, gene variation, and drug sensitivity. The relationship between AUNIP and clinicopathological information was explored using Wilcoxon test. The association between AUNIP and TMB, MSI, immunocyte infiltration, and immune checkpoints were analyzed using Spearman correlation analysis. We employed GSEA to research the functional mechanisms involved in AUNIP for pan-cancer. Moreover, we conducted immunohistochemistry (IHC) to investigate AUNIP difference expression between liver hepatocellular carcinoma (LIHC) and normal tissues. The Chisq test was used to study the correlation of AUNIP with clinical characteristics. AUNIP was highly expressed in majority of tumors and IHC analysis demonstrated that AUNIP expression was higher in LIHC than normal tissues. AUNIP overexpression had adverse outcomes in adrenocortical carcinoma (ACC), brain lower grade glioma (LGG), LIHC, mesothelioma (MESO), and sarcoma (SARC). Furthermore, high AUNIP expression led to unfavorable prognosis in LIHC. AUNIP was associated with T stage, N stage, and clinicopathological analysis in several cancers and AUNIP expression had a correlation with histologic grade in LIHC by IHC. Mutation analysis showed that AUNIP was the highest frequency of genetic changes in cholangiocarcinoma (CHOL). AUNIP was negatively associated with 30 small-molecule drugs that inhibit tumor development. AUNIP expression had association with TMB, MSI, immune cell infiltration, and immune checkpoints for various tumors. GSEA results suggested that AUNIP mainly participated in the cell cycle, DNA replication, mismatch repair, and homologous recombination.Pan-cancer study considered AUNIP as a potential prognostic marker and high latent diagnostic biomarker.

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来源期刊
3 Biotech
3 Biotech Agricultural and Biological Sciences-Agricultural and Biological Sciences (miscellaneous)
CiteScore
6.00
自引率
0.00%
发文量
314
期刊介绍: 3 Biotech publishes the results of the latest research related to the study and application of biotechnology to: - Medicine and Biomedical Sciences - Agriculture - The Environment The focus on these three technology sectors recognizes that complete Biotechnology applications often require a combination of techniques. 3 Biotech not only presents the latest developments in biotechnology but also addresses the problems and benefits of integrating a variety of techniques for a particular application. 3 Biotech will appeal to scientists and engineers in both academia and industry focused on the safe and efficient application of Biotechnology to Medicine, Agriculture and the Environment.
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