Yihong Wei, Hexiao Jia, Xiaodong Guo, Hailei Zhang, Xinyu Yang, Can Can, Na He, Hanyang Wu, Wancheng Liu, Daoxin Ma
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引用次数: 0
摘要
急性髓系白血病(Acute myeloid leukemia, AML)是成人中最常见的急性白血病,其异质性导致预后差,复发率高。最近,发现了一种独特的细胞死亡形式,称为二硫下垂,这可能会改变我们对癌症治疗的理解和策略。因此,有必要进一步探讨脂肪肝和AML之间的可能联系。为了便于分析,研究人员使用Gene Expression Omnibus (GEO)数据库获得了来自AML患者的单细胞RNA测序(scRNA-seq)数据。通过应用Cox比例风险模型和最小绝对收缩和选择算子(LASSO)回归分析,我们创建了与二硫分解相关的长链非编码rna (drl)的特征。该预测模型基于6个特异性drl (AC005076.1、AP002807.1、HDAC4-AS1、L3MBTL4-AS1、LINC01694和THAP9-AS1)建立。受试者工作特征(ROC)曲线证实了该模型预测AML患者预后的有效性。此外,通过基因本体(GO)和基因集富集分析(GSEA)发现了生物功能和信号通路的显著变化。为了进一步研究免疫浸润之间的关系,该研究评估了免疫检查点表达和免疫细胞亚群浸润的变化。此外,我们使用实时定量PCR (RT-qPCR)检测AML和健康对照中的lncRNA表达,以证实我们的分析结果。总之,本研究结果可能有助于发现AML的新治疗靶点和预后生物标志物,为定制精准化疗铺平道路。
A novel LncRNA risk model for disulfidptosis-related prognosis prediction and response to chemotherapy in acute myeloid leukemia.
Acute myeloid leukemia (AML), the most prevalent acute leukemia in adults, is characterized by its heterogeneity, which contributes to a poor prognosis and high recurrence rate. Recently, a unique form of cell death, called disulfidptosis, has been identified, which could transforming our understanding of and strategy for cancer treatment. Consequently, further inquiry is necessary to explore the possible link between disulfidptosis and AML. To facilitate this analysis, the researchers obtained single-cell RNA sequencing (scRNA-seq) data from AML patients using the Gene Expression Omnibus (GEO) database. By applying the Cox proportional hazards model and least absolute shrinkage and selection operator (LASSO) regression analysis, we created a signature of disulfidptosis-related long non-coding RNAs (DRLs). This predictive model was established based on six specific DRLs (AC005076.1, AP002807.1, HDAC4-AS1, L3MBTL4-AS1, LINC01694, and THAP9-AS1). The utility of this model in forecasting the prognosis of AML patients was corroborated by the receiver operating characteristic (ROC) curve. Moreover, significant variations in the biological functions and signaling pathways were discovered by gene ontology (GO) and Gene Set Enrichment Analysis (GSEA). To further investigate the relationship between immune infiltration, the study assessed variations in immune checkpoint expression and immune cell subset infiltration. Additionally, we used real-time quantitative PCR (RT-qPCR) to detect lncRNA expression in AML and healthy control to substantiate our analysis results. In conclusion, the results of this study may help discover novel therapeutic targets and prognostic biomarkers for AML, paving the way for customized precision chemotherapy.
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