Artem V. Semenov , Eugene A. Katlenok , Alexey M. Starosotnikov , Maxim A. Bastrakov , Mikhail E. Minyaev , Lev E. Zelenkov , Anton A. Shetnev , Alexander V. Sapegin , Vadim P. Boyarskiy , Sergey V. Baykov
{"title":"基于分子内S/Se⋅⋅⋅ONO2硫键的超分子结构设计","authors":"Artem V. Semenov , Eugene A. Katlenok , Alexey M. Starosotnikov , Maxim A. Bastrakov , Mikhail E. Minyaev , Lev E. Zelenkov , Anton A. Shetnev , Alexander V. Sapegin , Vadim P. Boyarskiy , Sergey V. Baykov","doi":"10.1002/ajoc.202500088","DOIUrl":null,"url":null,"abstract":"<div><div>A series of 2‐nitrochalcogenocyanato(hetero)arenes were synthesized by the reaction of 2‐nitrohalo(hetero)arenes with potassium thio‐ or selenocyanate. These compounds were characterized by NMR spectroscopy, high‐resolution mass spectrometry, and X‐ray crystallography. In the obtained crystal structures, strong intramolecular Ch⋅⋅⋅O<sub>NO2</sub> (Ch=S, Se) chalcogen bonds between the chalcogen atom of the chalcogenocyanate moiety and the nitro group were revealed. These interactions prevent rotation of the nitro group, and thus stabilize the obtained 2‐nitrochalcogenocyanato(hetero)arenes in a distorted planar geometry. In addition, intermolecular Ch⋅⋅⋅N chalcogen bonds were observed in some structures. Both intra‐ and intermolecular interactions were studied using methods based on first‐principles and DFT approaches (e. g. QTAIM, IGMH, ELF, NBO). Two of the synthesized chalcogenocyanates namely, 4‐nitro‐5‐thiocyanatophthalonitrile (<strong>2a</strong>) and 4‐nitro‐5‐selenocyanatophthalonitrile (<strong>2b</strong>) were identified as promising supramolecular tectons for cocrystallizations with aromatic hydrocarbons, and four new cocrystals (<strong>2 a⋅</strong>PhMe, <strong>2 a⋅</strong><em>o</em>‐XylH, <strong>2 a⋅</strong><em>p</em>‐XylH, and <strong>2 b⋅</strong>1.5(<em>p</em>‐XylH)) were obtained. X‐ray diffraction studies of these cocrystals demonstrated that in all cases molecules of the phthalonitrile (<strong>2 a</strong> or <strong>2 b</strong>) and the corresponding hydrocarbon are packed into infinity columnar stacks via π⋅⋅⋅π interactions, whereas intermolecular Ch⋅⋅⋅O/N ChBs bound them to form the final supramolecular architecture.</div></div>","PeriodicalId":130,"journal":{"name":"Asian Journal of Organic Chemistry","volume":"14 5","pages":"Article e202500088"},"PeriodicalIF":2.8000,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Design of Supramolecular Tectons via Intramolecular S/Se⋅⋅⋅ONO2 Chalcogen Bonding\",\"authors\":\"Artem V. Semenov , Eugene A. Katlenok , Alexey M. Starosotnikov , Maxim A. Bastrakov , Mikhail E. Minyaev , Lev E. Zelenkov , Anton A. Shetnev , Alexander V. Sapegin , Vadim P. Boyarskiy , Sergey V. Baykov\",\"doi\":\"10.1002/ajoc.202500088\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>A series of 2‐nitrochalcogenocyanato(hetero)arenes were synthesized by the reaction of 2‐nitrohalo(hetero)arenes with potassium thio‐ or selenocyanate. These compounds were characterized by NMR spectroscopy, high‐resolution mass spectrometry, and X‐ray crystallography. In the obtained crystal structures, strong intramolecular Ch⋅⋅⋅O<sub>NO2</sub> (Ch=S, Se) chalcogen bonds between the chalcogen atom of the chalcogenocyanate moiety and the nitro group were revealed. These interactions prevent rotation of the nitro group, and thus stabilize the obtained 2‐nitrochalcogenocyanato(hetero)arenes in a distorted planar geometry. In addition, intermolecular Ch⋅⋅⋅N chalcogen bonds were observed in some structures. Both intra‐ and intermolecular interactions were studied using methods based on first‐principles and DFT approaches (e. g. QTAIM, IGMH, ELF, NBO). Two of the synthesized chalcogenocyanates namely, 4‐nitro‐5‐thiocyanatophthalonitrile (<strong>2a</strong>) and 4‐nitro‐5‐selenocyanatophthalonitrile (<strong>2b</strong>) were identified as promising supramolecular tectons for cocrystallizations with aromatic hydrocarbons, and four new cocrystals (<strong>2 a⋅</strong>PhMe, <strong>2 a⋅</strong><em>o</em>‐XylH, <strong>2 a⋅</strong><em>p</em>‐XylH, and <strong>2 b⋅</strong>1.5(<em>p</em>‐XylH)) were obtained. X‐ray diffraction studies of these cocrystals demonstrated that in all cases molecules of the phthalonitrile (<strong>2 a</strong> or <strong>2 b</strong>) and the corresponding hydrocarbon are packed into infinity columnar stacks via π⋅⋅⋅π interactions, whereas intermolecular Ch⋅⋅⋅O/N ChBs bound them to form the final supramolecular architecture.</div></div>\",\"PeriodicalId\":130,\"journal\":{\"name\":\"Asian Journal of Organic Chemistry\",\"volume\":\"14 5\",\"pages\":\"Article e202500088\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-05-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Asian Journal of Organic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/org/science/article/pii/S2193580725001217\",\"RegionNum\":4,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, ORGANIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Asian Journal of Organic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/org/science/article/pii/S2193580725001217","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, ORGANIC","Score":null,"Total":0}
Design of Supramolecular Tectons via Intramolecular S/Se⋅⋅⋅ONO2 Chalcogen Bonding
A series of 2‐nitrochalcogenocyanato(hetero)arenes were synthesized by the reaction of 2‐nitrohalo(hetero)arenes with potassium thio‐ or selenocyanate. These compounds were characterized by NMR spectroscopy, high‐resolution mass spectrometry, and X‐ray crystallography. In the obtained crystal structures, strong intramolecular Ch⋅⋅⋅ONO2 (Ch=S, Se) chalcogen bonds between the chalcogen atom of the chalcogenocyanate moiety and the nitro group were revealed. These interactions prevent rotation of the nitro group, and thus stabilize the obtained 2‐nitrochalcogenocyanato(hetero)arenes in a distorted planar geometry. In addition, intermolecular Ch⋅⋅⋅N chalcogen bonds were observed in some structures. Both intra‐ and intermolecular interactions were studied using methods based on first‐principles and DFT approaches (e. g. QTAIM, IGMH, ELF, NBO). Two of the synthesized chalcogenocyanates namely, 4‐nitro‐5‐thiocyanatophthalonitrile (2a) and 4‐nitro‐5‐selenocyanatophthalonitrile (2b) were identified as promising supramolecular tectons for cocrystallizations with aromatic hydrocarbons, and four new cocrystals (2 a⋅PhMe, 2 a⋅o‐XylH, 2 a⋅p‐XylH, and 2 b⋅1.5(p‐XylH)) were obtained. X‐ray diffraction studies of these cocrystals demonstrated that in all cases molecules of the phthalonitrile (2 a or 2 b) and the corresponding hydrocarbon are packed into infinity columnar stacks via π⋅⋅⋅π interactions, whereas intermolecular Ch⋅⋅⋅O/N ChBs bound them to form the final supramolecular architecture.
期刊介绍:
Organic chemistry is the fundamental science that stands at the heart of chemistry, biology, and materials science. Research in these areas is vigorous and truly international, with three major regions making almost equal contributions: America, Europe and Asia. Asia now has its own top international organic chemistry journal—the Asian Journal of Organic Chemistry (AsianJOC)
The AsianJOC is designed to be a top-ranked international research journal and publishes primary research as well as critical secondary information from authors across the world. The journal covers organic chemistry in its entirety. Authors and readers come from academia, the chemical industry, and government laboratories.