Hai-Bin Luo , Hui-Qing Cao , Cheng-Mei Huang , Xing-Jian Wu , Li-Pin Ye , Yuan-Wen Wei
{"title":"百香果(Passiflora edulis Sims)钾转运蛋白HAK家族基因的全基因组鉴定和功能分析","authors":"Hai-Bin Luo , Hui-Qing Cao , Cheng-Mei Huang , Xing-Jian Wu , Li-Pin Ye , Yuan-Wen Wei","doi":"10.1016/j.plaphy.2025.109995","DOIUrl":null,"url":null,"abstract":"<div><div>The nutritional status of potassium directly affects the yield and quality of fruits. The molecular mechanism underlying K<sup>+</sup> uptake and transport in passion fruit (<em>Passiflora edulis</em> Sims), particularly under K<sup>+</sup> limited conditions, remains poorly understood. Members of the high-affinity K<sup>+</sup> (HAK) transporter family play a vital role in K<sup>+</sup> acquisition, translocation, and stress responses. However, the biological functions of these genes in passion fruit plants are still unknown. This study identified 14 <em>HAK</em> genes (<em>PeHAKs</em>) in <em>Passiflora edulis</em> genome. Phylogenetic analysis classified these <em>PeHAKs</em> into three distinct clusters containing 9, 4, and 1 genes, respectively, with conserved structural features supporting their functional divergence. Promoter analysis revealed 12 predominant cis-acting elements, including hormone-responsive, stress-inducible, and core transcriptional regulatory motifs. Tissue-specific expression profiling demonstrated significant organ-dependent expression patterns of <em>PeHAKs</em> across roots, stems, leaves (young/mature), flowers, and fruits. Under K<sup>+</sup> deficiency, salinity stress, and phytohormone treatments, the transcript levels of <em>PeHAKs</em> were significantly altered in roots and leaves. Notably, <em>PeHAK10</em> exhibited dual induction in aerial and subterranean tissues under K<sup>+</sup> deprivation. Functional complementation assays in yeast validated the K<sup>+</sup>/Na <sup>+</sup> transport activity of <em>PeHAK10</em>, suggesting its involvement in ion homeostasis regulation during nutrient stress. This study provides the first genome-wide characterization of the <em>PeHAKs</em> family of genes in passion fruit plants, establishing a foundation for elucidating their biological roles in potassium nutrition regulation and stress adaptation.</div></div>","PeriodicalId":20234,"journal":{"name":"Plant Physiology and Biochemistry","volume":"225 ","pages":"Article 109995"},"PeriodicalIF":6.1000,"publicationDate":"2025-05-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genome wide identification and functional analyses of HAK family potassium transporter genes in passion fruit (Passiflora edulis Sims) in response to potassium deficiency and stress responses\",\"authors\":\"Hai-Bin Luo , Hui-Qing Cao , Cheng-Mei Huang , Xing-Jian Wu , Li-Pin Ye , Yuan-Wen Wei\",\"doi\":\"10.1016/j.plaphy.2025.109995\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The nutritional status of potassium directly affects the yield and quality of fruits. The molecular mechanism underlying K<sup>+</sup> uptake and transport in passion fruit (<em>Passiflora edulis</em> Sims), particularly under K<sup>+</sup> limited conditions, remains poorly understood. Members of the high-affinity K<sup>+</sup> (HAK) transporter family play a vital role in K<sup>+</sup> acquisition, translocation, and stress responses. However, the biological functions of these genes in passion fruit plants are still unknown. This study identified 14 <em>HAK</em> genes (<em>PeHAKs</em>) in <em>Passiflora edulis</em> genome. Phylogenetic analysis classified these <em>PeHAKs</em> into three distinct clusters containing 9, 4, and 1 genes, respectively, with conserved structural features supporting their functional divergence. Promoter analysis revealed 12 predominant cis-acting elements, including hormone-responsive, stress-inducible, and core transcriptional regulatory motifs. Tissue-specific expression profiling demonstrated significant organ-dependent expression patterns of <em>PeHAKs</em> across roots, stems, leaves (young/mature), flowers, and fruits. Under K<sup>+</sup> deficiency, salinity stress, and phytohormone treatments, the transcript levels of <em>PeHAKs</em> were significantly altered in roots and leaves. Notably, <em>PeHAK10</em> exhibited dual induction in aerial and subterranean tissues under K<sup>+</sup> deprivation. Functional complementation assays in yeast validated the K<sup>+</sup>/Na <sup>+</sup> transport activity of <em>PeHAK10</em>, suggesting its involvement in ion homeostasis regulation during nutrient stress. This study provides the first genome-wide characterization of the <em>PeHAKs</em> family of genes in passion fruit plants, establishing a foundation for elucidating their biological roles in potassium nutrition regulation and stress adaptation.</div></div>\",\"PeriodicalId\":20234,\"journal\":{\"name\":\"Plant Physiology and Biochemistry\",\"volume\":\"225 \",\"pages\":\"Article 109995\"},\"PeriodicalIF\":6.1000,\"publicationDate\":\"2025-05-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Physiology and Biochemistry\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0981942825005236\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Physiology and Biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0981942825005236","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
Genome wide identification and functional analyses of HAK family potassium transporter genes in passion fruit (Passiflora edulis Sims) in response to potassium deficiency and stress responses
The nutritional status of potassium directly affects the yield and quality of fruits. The molecular mechanism underlying K+ uptake and transport in passion fruit (Passiflora edulis Sims), particularly under K+ limited conditions, remains poorly understood. Members of the high-affinity K+ (HAK) transporter family play a vital role in K+ acquisition, translocation, and stress responses. However, the biological functions of these genes in passion fruit plants are still unknown. This study identified 14 HAK genes (PeHAKs) in Passiflora edulis genome. Phylogenetic analysis classified these PeHAKs into three distinct clusters containing 9, 4, and 1 genes, respectively, with conserved structural features supporting their functional divergence. Promoter analysis revealed 12 predominant cis-acting elements, including hormone-responsive, stress-inducible, and core transcriptional regulatory motifs. Tissue-specific expression profiling demonstrated significant organ-dependent expression patterns of PeHAKs across roots, stems, leaves (young/mature), flowers, and fruits. Under K+ deficiency, salinity stress, and phytohormone treatments, the transcript levels of PeHAKs were significantly altered in roots and leaves. Notably, PeHAK10 exhibited dual induction in aerial and subterranean tissues under K+ deprivation. Functional complementation assays in yeast validated the K+/Na + transport activity of PeHAK10, suggesting its involvement in ion homeostasis regulation during nutrient stress. This study provides the first genome-wide characterization of the PeHAKs family of genes in passion fruit plants, establishing a foundation for elucidating their biological roles in potassium nutrition regulation and stress adaptation.
期刊介绍:
Plant Physiology and Biochemistry publishes original theoretical, experimental and technical contributions in the various fields of plant physiology (biochemistry, physiology, structure, genetics, plant-microbe interactions, etc.) at diverse levels of integration (molecular, subcellular, cellular, organ, whole plant, environmental). Opinions expressed in the journal are the sole responsibility of the authors and publication does not imply the editors'' agreement.
Manuscripts describing molecular-genetic and/or gene expression data that are not integrated with biochemical analysis and/or actual measurements of plant physiological processes are not suitable for PPB. Also "Omics" studies (transcriptomics, proteomics, metabolomics, etc.) reporting descriptive analysis without an element of functional validation assays, will not be considered. Similarly, applied agronomic or phytochemical studies that generate no new, fundamental insights in plant physiological and/or biochemical processes are not suitable for publication in PPB.
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