基于格子的随机模型激发基于记忆的扩散的非线性扩散描述。

IF 2.3 4区 数学 Q2 BIOLOGY
Yifei Li, Matthew J Simpson, Chuncheng Wang
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引用次数: 0

摘要

记忆和认知在种群内个体(如动物)运动中的作用被认为在种群分散中起着重要作用。因此,人们对将空间记忆效应纳入动物扩散的经典偏微分方程(PDE)模型越来越感兴趣。然而,传输项的具体细节,如扩散和平流项,应该纳入PDE模型中以准确反映记忆效应,目前尚不清楚。为了弥补这一差距,我们提出了一个简单的基于格子的模型,其中个体的运动取决于拥挤效应和模拟中的历史分布。使用基于个体的模型的优势在于,与简单地提出经典PDE模型的启发式扩展相比,在模拟中以一种更直观的生物学方式提出和实现记忆效应更直接。通过推导随机模型的连续统极限描述,得到了一个包含基于记忆的扩散项的非线性扩散方程。我们首次揭示了基于记忆的扩散和依赖于记忆效应的基于个体的运动机制之间的关系。通过对平均场PDE模型的反复随机模拟和数值探索,我们表明新的PDE模型准确地描述了随机模型的预期行为,我们还探讨了记忆效应如何影响种群分散。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Lattice-based stochastic models motivate non-linear diffusion descriptions of memory-based dispersal.

The role of memory and cognition in the movement of individuals (e.g. animals) within a population, is thought to play an important role in population dispersal. In response, there has been increasing interest in incorporating spatial memory effects into classical partial differential equation (PDE) models of animal dispersal. However, the specific detail of the transport terms, such as diffusion and advection terms, that ought to be incorporated into PDE models to accurately reflect the memory effect remains unclear. To bridge this gap, we propose a straightforward lattice-based model where the movement of individuals depends on both crowding effects and the historic distribution within the simulation. The advantage of working with the individual-based model is that it is straightforward to propose and implement memory effects within the simulation in a way that is more biologically intuitive than simply proposing heuristic extensions of classical PDE models. Through deriving the continuum limit description of our stochastic model, we obtain a novel nonlinear diffusion equation which encompasses memory-based diffusion terms. For the first time we reveal the relationship between memory-based diffusion and the individual-based movement mechanisms that depend upon memory effects. Through repeated stochastic simulation and numerical explorations of the mean-field PDE model, we show that the new PDE model accurately describes the expected behaviour of the stochastic model, and we also explore how memory effects impact population dispersal.

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来源期刊
CiteScore
3.30
自引率
5.30%
发文量
120
审稿时长
6 months
期刊介绍: The Journal of Mathematical Biology focuses on mathematical biology - work that uses mathematical approaches to gain biological understanding or explain biological phenomena. Areas of biology covered include, but are not restricted to, cell biology, physiology, development, neurobiology, genetics and population genetics, population biology, ecology, behavioural biology, evolution, epidemiology, immunology, molecular biology, biofluids, DNA and protein structure and function. All mathematical approaches including computational and visualization approaches are appropriate.
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