解开利什曼原虫的主要元胞发生:转录组学和代谢组学的综合分析

Q2 Biochemistry, Genetics and Molecular Biology
Mansour Aminzadeh, Fariborz Bahrami, Zeynab Piryaei, Mahdi Vasighi, Zahra Kalantari, Mohammad Arjmand, Soheila Ajdary
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引用次数: 0

摘要

背景:超循环发生是利什曼原虫生命周期中一个关键的发育过程,特别是在它们从非感染性原循环原虫向感染性超循环原虫过渡的过程中。这种转化与寄生虫的代谢适应密切相关,优化其生存和研究,我们整合代谢组学和转录组学数据,以获得利什曼原虫主要元胞形成的更深层次的分子机制。方法:采用¹H-NMR技术首次鉴定原环和亚环promastigotes的代谢谱。进行多变量统计分析以区分两种形式的不同代谢物。使用KEGG数据库进行代谢途径分析,以确定代谢组学谱中显著改变和过度代表的代谢途径。最后,对从公共数据库检索的转录组数据进行差异基因表达和途径富集分析。结果:多因素统计分析显示,两种形态的44种代谢物和10种途径存在显著差异。元细胞发生过程中的转录组基因。对这些基因进行了GO和KEGG通路分析,揭示了在亚环期上调的GO类别,包括蛋白质磷酸化、离子转运、信号转导和磷酸化反应,以及几种下调的GO类别。综合代谢组学和转录组学数据显示,在原环和亚环形式之间,有7种显著不同的KEGG途径,包括果糖和甘露糖、半乳糖、抗坏血酸和醛酸盐、精氨酸和脯氨酸、组氨酸、磷酸肌醇和丙酮酸代谢。结论:我们的研究结果表明,不同的代谢谱和基因表达的变化与从原环到元环的转变有关。通过整合不同的组学数据,我们可以确定更可靠的改变途径和生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Unraveling Leishmania major Metacyclogenesis: A Comprehensive Analysis of Transcriptomic and Metabolomic Profiles

Background: Metacyclogenesis is a critical developmental process in the life cycle of Leishmania parasites, particularly in their transition from non-infective procyclic to infective metacyclic promastigotes. This transformation is closely linked to the metabolic adaptation of the parasite, optimizing its survival and study, we integrated metabolomics and transcriptomics data to gain deeper molecular mechanisms of Leishmania major metacyclogenesis.

Methods: The metabolic profiles of procyclic and metacyclic promastigotes were first identified using ¹H-NMR spectroscopy. Multivariate statistical analysis conducted to distinguish different metabolites between the two forms. Metabolic pathway analysis was performed using the KEGG database to identify the metabolic pathways that significantly altered and overrepresented in the metabolomic profile. Finally, the differential gene expression and pathway enrichment analyses were conducted on transcriptomic data retrieved from public repositories.

Result: Multivariate statistical analysis revealed that 44 metabolites and ten pathways were significantly different between the two forms. Transcriptome genes during metacyclogenesis. These genes underwent GO and KEGG pathway analyses, revealing upregulated GO categories in the metacyclic phase, including protein phosphorylation, ion transport, signal transduction, and phosphorylation reactions, as well as several downregulated GO categories. Integrating metabolomic and transcriptomic data demonstrated seven significantly different KEGG pathways between procyclic and metacyclic forms, including fructose and mannose, galactose, ascorbate and aldarate, arginine and proline, histidine, inositol phosphate, and pyruvate metabolism.

Conclusion: Our findings suggest distinct metabolic profiles and changes in gene expression associated with the transition from procyclic to metacyclic promastigotes. By integrating diverse omics data, we could identify more reliable altered pathways and biomarkers.

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来源期刊
Iranian Biomedical Journal
Iranian Biomedical Journal Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)
CiteScore
3.20
自引率
0.00%
发文量
42
审稿时长
8 weeks
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