Xiao Liu, Zhenjun Li, Hongzhen Xu, Wangqing He, Lei Wu, Bin Ji, Nuerzhati Nuermaimaiti, Guangnan Ao, Yuhang Feng, Xuying He
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引用次数: 0
摘要
颅内动脉瘤(IAs)和腹主动脉瘤(AAAs)都是密切相关的血管疾病。然而,IAs和AAAs共存的发病机制尚不清楚。本研究旨在利用生物信息学分析确定连接这两种疾病的分子机制的关键生物标志物。基因表达谱(GSE122897, GSE237229)从Gene expression Omnibus (GEO)数据库中获得。鉴定了IAs和AAAs共有的差异表达基因(DEGs),并进行了功能富集分析。使用Cytoscape cytoHubba插件识别枢纽基因,并使用受试者工作特征(ROC)曲线评估其预测能力。对中心基因进行免疫浸润分析和单基因集富集分析(GSEA)。共鉴定出46个基因,其中上调基因40个,下调基因6个。常见的deg被发现参与细胞外基质结构成分、胶原原纤维组织和基本细胞过程的调节。ITGA11被鉴定为与IAs和AAAs共病相关的关键基因,其上调与浆细胞密切相关。此外,在IAs和AAAs中,细胞外基质组分的糖胺聚糖生物合成和免疫相关疾病与ITGA11的高表达显著相关。我们的研究结果表明,IAs和AAAs的合并症可能是由共同的炎症和免疫反应机制驱动的,而ITGA11可能是这种合并症的潜在生物标志物。
Revealing shared molecular and mechanistic signatures between intracranial aneurysms and abdominal aortic aneurysms: a comprehensive genomic analysis.
Intracranial aneurysms (IAs) and abdominal aortic aneurysms (AAAs) are both vascular diseases that are closely linked. However, the pathogenesis underlying the co-occurrence of IAs and AAAs remains poorly understood. This study aims to identify key biomarkers that shed light on the molecular mechanisms connecting these two diseases using bioinformatics analysis. Gene expression profiles (GSE122897, GSE237229) were obtained from the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) common to both IAs and AAAs were identified and subjected to functional enrichment analysis. The Cytoscape cytoHubba plugin was used to identify hub genes, and their predictive ability was evaluated using the receiver operating characteristic (ROC) curve. Additionally, immune infiltration analyses and single-gene gene set enrichment analysis (GSEA) were conducted for the hub genes. A total of 46 DEGs were identified, including 40 upregulated genes and 6 downregulated genes. The common DEGs were found to be involved in extracellular matrix structural constituents, collagen fibril organization, and regulation of basic cellular processes. ITGA11 was identified as a key gene implicated in the comorbidity of IAs and AAAs, with its upregulation strongly associated with plasma cells. Furthermore, in both IAs and AAAs, glycosaminoglycan biosynthesis of extracellular matrix components and immune-related diseases were significantly linked to the high expression of ITGA11. Our findings suggest that the comorbidity of IAs and AAAs may be driven by shared inflammatory and immune response mechanisms, with ITGA11 emerging as a potential biomarker for this co-occurrence.
期刊介绍:
Orphanet Journal of Rare Diseases is an open access, peer-reviewed journal that encompasses all aspects of rare diseases and orphan drugs. The journal publishes high-quality reviews on specific rare diseases. In addition, the journal may consider articles on clinical trial outcome reports, either positive or negative, and articles on public health issues in the field of rare diseases and orphan drugs. The journal does not accept case reports.