巨肌蛋白连接蛋白/连接蛋白的起源和进化。

IF 2.1 3区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Akira Hanashima, Yuu Usui, Ken Hashimoto, Satoshi Mohri
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引用次数: 0

摘要

连接蛋白(connectin)的出现,也被称为titin,是一种肌肉弹簧,是生物体中最大的蛋白质,在后生动物的进化中至关重要,因为它使横纹肌运动成为可能。然而,它的进化历史仍不清楚。在此,我们利用基因组分析研究了连接蛋白的进化过程,并推断了连接蛋白的祖先。在人类基因组中,连接蛋白基因(CON (TTN))位于HOX和WNT簇之间的区域,在有颌脊椎动物祖先的两轮全基因组复制(WGD)中翻了两番。然而,在有颌脊椎动物出现之前,连接蛋白基因被删除了,导致了单一的连接蛋白基因。此外,硬骨鱼第三轮WGD产生的一个连接蛋白消失,而另一个连接蛋白在同一染色体上复制。我们还发现连接蛋白和连接蛋白家族基因一致地在同一染色体上进行局部复制,尽管潜在的机制尚不清楚。通过合成分析,我们确定了KALRN和它的技术TRIO作为连接蛋白基因的假定祖先相似物。TRIO/KALRN具有SESTD1-CCDC141-CON (TTN)的连接结构,其同源性在果蝇基因组中是保守的。此外,我们证实了这种被称为“连接蛋白”(connected-connectin/titin)的连接结构在刺胞动物和placozoans中是保守的。分子系统发育分析显示,在这些动物出现之前,它与TRIO/KALRN分化,表明后生动物肌肉可能有一个单一的起源。这些发现增强了我们对动物界横纹肌进化过程的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The Ancestor and Evolution of the Giant Muscle Protein Connectin/Titin.

The emergence of connectin, also called titin, a muscular spring and the largest protein in living organisms, is critical in metazoan evolution as it enables striated muscle-based locomotion. However, its evolutionary history remains unclear. Here, we investigated the evolutionary process using genomic analysis and deduced the ancestor of connectin. The region between the HOX and WNT clusters in the human genome, where the connectin gene (CON (TTN)) is located, was quadrupled by two rounds of whole-genome duplication (WGD) in the ancestor of jawed vertebrates. However, connectin ohnologs were deleted before the advent of jawed vertebrates, resulting in a single connectin gene. Additionally, one of the connectin ohnologs created by the third round of teleost WGD disappeared, while the other was duplicated on the same chromosome. We also discovered that the connectin and connectin family genes consistently underwent local duplication on the same chromosome, though the underlying mechanism remains unknown. Using synteny analysis, we identified KALRN and its ohnolog TRIO as putative ancestral paralogs of the connectin gene. TRIO/KALRN has a connected structure of SESTD1-CCDC141-CON (TTN), and its synteny is conserved in the Drosophila genome. Furthermore, we confirmed that this connected structure, termed 'connectitin,' (connected-connectin/titin) is conserved in cnidarians and placozoans. Molecular phylogenetic analysis revealed that it diverged from TRIO/KALRN prior to the emergence of these animals, suggesting that metazoan muscle may have a single origin. These findings enhance our understanding of the evolutionary processes of striated muscles in the animal kingdom.

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来源期刊
Journal of Molecular Evolution
Journal of Molecular Evolution 生物-进化生物学
CiteScore
5.50
自引率
2.60%
发文量
36
审稿时长
3 months
期刊介绍: Journal of Molecular Evolution covers experimental, computational, and theoretical work aimed at deciphering features of molecular evolution and the processes bearing on these features, from the initial formation of macromolecular systems through their evolution at the molecular level, the co-evolution of their functions in cellular and organismal systems, and their influence on organismal adaptation, speciation, and ecology. Topics addressed include the evolution of informational macromolecules and their relation to more complex levels of biological organization, including populations and taxa, as well as the molecular basis for the evolution of ecological interactions of species and the use of molecular data to infer fundamental processes in evolutionary ecology. This coverage accommodates such subfields as new genome sequences, comparative structural and functional genomics, population genetics, the molecular evolution of development, the evolution of gene regulation and gene interaction networks, and in vitro evolution of DNA and RNA, molecular evolutionary ecology, and the development of methods and theory that enable molecular evolutionary inference, including but not limited to, phylogenetic methods.
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