MUC15作为抑癌基因,与食管鳞状细胞癌的预后和免疫浸润相关。

IF 3.2 3区 医学 Q1 MEDICINE, GENERAL & INTERNAL
International Journal of Medical Sciences Pub Date : 2025-03-21 eCollection Date: 2025-01-01 DOI:10.7150/ijms.108926
Xiang Fei, Ai-Li Wang, Hao Wu, Si-Wei Xing, Lei Chen, Ying Chen, Xue-Jing Lin, Hai-Long Liu, Bin Sun
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引用次数: 0

摘要

食管鳞状细胞癌(ESCC)作为一种常见的消化系统恶性肿瘤,一直是提高和延长患者术后生存的一个挑战。本研究旨在利用生物信息学方法,寻找能够指导临床诊断和治疗的新型生物标志物。从TCGA和GEO数据库下载ESCC的RNA-seq数据和相应的临床数据。加权共表达网络分析(WGCNA)用于鉴定候选生物标志物。采用LASSO分析对生物标志物进行分类。采用ROC曲线和AUC评价生物标志物的敏感性和特异性。应用CIBERSORT通过基因表达谱来估计免疫细胞类型的相对丰度。采用单因素和多因素Cox回归筛选预后因素。MUC15作为候选生物标志物,在不同类型的肿瘤中异常表达不同的生理过程,参与抑制或促进功能。最后,我们通过体外和体内实验验证了MUC15在ESCC组织中的表达及其对细胞功能的抑制作用。总之,我们发现MUC15可以作为肿瘤抑制基因,并可能成为ESCC个体化临床诊断和治疗的有希望的候选基因。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
MUC15 acts as a tumor suppressor gene which correlates with prognosis and immune infiltration in esophageal squamous cell carcinoma.

Esophageal squamous cell carcinoma (ESCC), as a common malignant tumor of the digestive system, has been a challenge in improving and prolonging the postoperative survival of patients. This study aims to identify novel biomarkers that can guide the clinical diagnosis and treatment by using bioinformatics methods. The RNA-seq data and corresponding clinical data of ESCC were downloaded from the TCGA and GEO database. Weighted co-expression network analysis (WGCNA) was used to identify candidate biomarkers. The LASSO analysis was performed to classify the biomarkers. ROC curve and AUC were used to evaluate the sensitivity and specificity of biomarkers. CIBERSORT was applied to estimate the relative abundances of immune cell types through gene expression profiling. Univariate and multiple Cox regression were performed to screen out prognostic factors. MUC15, which abnormally expressed in different physiological processes and participates in inhibiting or promoting function in different types of tumors, was selected of candidate biomarker. Finally, we validated the expression of MUC15 in ESCC tissues and its inhibitory effect on cell function through in vitro and in vivo experiments. In conclusion, we identified MUC15 could serve as a tumor suppressor gene and may become a promising candidate for individualized clinical diagnosis and treatment of ESCC.

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来源期刊
International Journal of Medical Sciences
International Journal of Medical Sciences MEDICINE, GENERAL & INTERNAL-
CiteScore
7.20
自引率
0.00%
发文量
185
审稿时长
2.7 months
期刊介绍: Original research papers, reviews, and short research communications in any medical related area can be submitted to the Journal on the understanding that the work has not been published previously in whole or part and is not under consideration for publication elsewhere. Manuscripts in basic science and clinical medicine are both considered. There is no restriction on the length of research papers and reviews, although authors are encouraged to be concise. Short research communication is limited to be under 2500 words.
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