通过基于深度学习的图像恢复在早期细胞板形成过程中明确的肌动蛋白微丝定位。

IF 5.3 2区 生物学 Q1 PLANT SCIENCES
Suzuka Kikuchi, Takumi Kotaka, Yuga Hanaki, Minako Ueda, Takumi Higaki
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引用次数: 0

摘要

利用基于深度学习的图像恢复,我们以最小的光损伤实现了高分辨率的4D成像,揭示了不同的定位,并表明lifeact - rfp标记的肌动蛋白微丝在启动细胞板形成中起作用。膜质体是植物特有的细胞内结构,由微管、肌动蛋白微丝(AFs)、膜和相关蛋白组成。重要的是,它们参与细胞分裂过程中分裂子细胞的细胞板的形成和扩增。虽然先前的研究已经揭示了细胞骨架动力学在片质体正常功能中的重要作用,但AFs在细胞板形成初始阶段的定位和作用仍然存在争议。在这里,我们使用基于深度学习的图像恢复技术,以最小的激光诱导损伤实现高分辨率四维成像,使我们能够研究用Lifeact-RFP或RFP-ABD2(肌动蛋白结合结构域2)标记的转基因烟草BY-2细胞在细胞板形成初期的AFs动态。这种计算方法克服了传统成像的局限性,即激光引起的光漂白和光毒性。修复后的图像显示,rfp - abd2标记的AFs主要分布在子核附近,而lifeact - rfp标记的AFs不仅分布在子核附近,还分布在初始细胞板周围。这些发现,通过长时间曝光成像验证,突出了两种AF探针之间不同的定位模式,并表明lifeact - rfp标记的AF在启动细胞板形成中起作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Distinct actin microfilament localization during early cell plate formation through deep learning-based image restoration.

Key message: Using deep learning-based image restoration, we achieved high-resolution 4D imaging with minimal photodamage, revealing distinct localization and suggesting Lifeact-RFP-labeled actin microfilaments play a role in initiating cell plate formation. Phragmoplasts are plant-specific intracellular structures composed of microtubules, actin microfilaments (AFs), membranes, and associated proteins. Importantly, they are involved in the formation and the expansion of cell plates that partition daughter cells during cell division. While previous studies have revealed the important role of cytoskeletal dynamics in the proper functioning of the phragmoplast, the localization and the role of AFs in the initial phase of cell plate formation remain controversial. Here, we used deep learning-based image restoration to achieve high-resolution 4D imaging with minimal laser-induced damage, enabling us to investigate the dynamics of AFs during the initial phase of cell plate formation in transgenic tobacco BY-2 cells labeled with Lifeact-RFP or RFP-ABD2 (actin-binding domain 2). This computational approach overcame the limitation of conventional imaging, namely laser-induced photobleaching and phototoxicity. The restored images indicated that RFP-ABD2-labeled AFs were predominantly localized near the daughter nucleus, whereas Lifeact-RFP-labeled AFs were found not only near the daughter nucleus but also around the initial cell plate. These findings, validated by imaging with a long exposure time, highlight distinct localization patterns between the two AF probes and suggest that Lifeact-RFP-labeled AFs play a role in initiating cell plate formation.

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来源期刊
Plant Cell Reports
Plant Cell Reports 生物-植物科学
CiteScore
10.80
自引率
1.60%
发文量
135
审稿时长
3.2 months
期刊介绍: Plant Cell Reports publishes original, peer-reviewed articles on new advances in all aspects of plant cell science, plant genetics and molecular biology. Papers selected for publication contribute significant new advances to clearly identified technological problems and/or biological questions. The articles will prove relevant beyond the narrow topic of interest to a readership with broad scientific background. The coverage includes such topics as: - genomics and genetics - metabolism - cell biology - abiotic and biotic stress - phytopathology - gene transfer and expression - molecular pharming - systems biology - nanobiotechnology - genome editing - phenomics and synthetic biology The journal also publishes opinion papers, review and focus articles on the latest developments and new advances in research and technology in plant molecular biology and biotechnology.
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