杭州毛梭竹林土壤中分离的杭州兄弟曲菌。

IF 2.3 3区 生物学 Q3 MICROBIOLOGY
Fu Yang, Jinjun Yue, Qin Wang, Weiwei Zha, Yanxu Zhou, Jinling Yuan, Lubin Li, Qiwu Sun, Lei Liu
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引用次数: 0

摘要

从杭州毛竹林土壤中分离到一种新型细菌STR12T。该菌株为革兰氏染色阴性,棒状,活动细菌;28℃培养3天后,菌落呈黄色、圆形、扁平、粘稠、不湿润、边缘光滑。菌株生长温度为15 ~ 37℃(最适温度为28℃),pH值为4.0 ~ 8.0(最适温度为pH 7.0),盐度为0 ~ 5% (w/v) NaCl(最适温度为1%)。基于16S rRNA基因序列的系统发育分析表明,该菌株属于Frateuria属的一个聚类,与Frateuria flava MAH-13T的相似性最高(97.7%)。菌株STR12T基因组长3.74 Mb, G+C含量为67.9%。STR12T与Frateuria属其他物种的基因组比对结果显示,其核苷酸同源性、DNA-DNA杂交和氨基酸同源性的平均值分别为73.9 ~ 85.9%、20.8 ~ 30.7%和62.7 ~ 86.7%,均低于原核物种划分阈值。菌株STR12T的优势醌类为泛醌-8,主要脂肪酸为iso-C15:0、iso-C16:0、iso-C17:0和sum Feature 9。极性脂质包括二磷脂酰甘油、磷脂酰乙醇胺、两种未识别的氨基磷脂和一种未识别的磷酸糖脂。在系统发育、生理和化学分类分析的基础上,我们将该属新种命名为Frateuria hangzhouensis sp. 11,其类型菌株为STR12T (= ACCC 61897T = GDMCC 1.2964T = JCM 35226T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Frateuria hangzhouensis sp. nov. Isolated from Soil of Moso Bamboo Forest in Hangzhou, China.

A novel bacterium, designated STR12T, was isolated from the soil of a moso bamboo (Phyllostachys edulis) forest in Hangzhou, China. The strain was a Gram-stain-negative, rod-shaped, motile bacterium; the colonies of which were yellow, round, flat, sticky, and non-moist with a smooth margin after cultivation for 3 days at 28 °C. The strain grew at temperatures between 15 and 37 °C (optimum, 28 °C), pH values from 4.0 to 8.0 (optimum, pH 7.0), and salinities ranging from 0 to 5% (w/v) NaCl (optimum, 1%). Phylogenetic analyses based on the 16S rRNA gene sequence revealed that the strain was grouped within a cluster of the genus Frateuria, showing the highest similarity with Frateuria flava MAH-13T (97.7%). The genome of strain STR12T was 3.74 Mb in length with a G+C content of 67.9%. Genome comparisons of strain STR12T with other species within the genus Frateuria revealed that the range of average nucleotide identity, DNA-DNA hybridization, and average amino acid identity values were 73.9-85.9%, 20.8-30.7%, and 62.7-86.7%, respectively, all of those were below the respective prokaryotic species delineation thresholds. The predominant quinone in strain STR12T was ubiquinone-8 and the major fatty acids were iso-C15:0, iso-C16:0, iso-C17:0, and Summed Feature 9. Polar lipids included diphosphatidylglycerol, phosphatidylethanolamine, two unidentified aminophospholipids, and one unidentified phosphoglycolipid. On basis of the finding of phylogenetic, physiological, and chemotaxonomic analyses, we proposed the name Frateuria hangzhouensis sp. nov. for the novel species in the genus Frateuria, of which the type strain was strain STR12T (= ACCC 61897T = GDMCC 1.2964T = JCM 35226T).

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来源期刊
Current Microbiology
Current Microbiology 生物-微生物学
CiteScore
4.80
自引率
3.80%
发文量
380
审稿时长
2.5 months
期刊介绍: Current Microbiology is a well-established journal that publishes articles in all aspects of microbial cells and the interactions between the microorganisms, their hosts and the environment. Current Microbiology publishes original research articles, short communications, reviews and letters to the editor, spanning the following areas: physiology, biochemistry, genetics, genomics, biotechnology, ecology, evolution, morphology, taxonomy, diagnostic methods, medical and clinical microbiology and immunology as applied to microorganisms.
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