牙周炎和胰腺癌中常见mirna差异表达的鉴定。

IF 1.8 4区 医学 Q3 MEDICINE, RESEARCH & EXPERIMENTAL
In vivo Pub Date : 2025-05-01 DOI:10.21873/invivo.13944
Deniz Sunnetci-Akkoyunlu, Cansu Ugurtas, Nurhan Kulcu-Sarikaya, Tolgahan Ozer, Naci Cine, Seda Eren-Keskin, Aylin Kanli, Hakan Savli
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引用次数: 0

摘要

背景/目的:牙周炎是一种常见的多因素口腔感染性疾病,被认为是胰腺癌的高危因素。然而,对控制这种关系的潜在表观遗传机制的理解有限。本研究的目的是鉴定与牙周炎和胰腺癌相关的异常mirna,以及它们的相关基因、信号通路和化合物。材料和方法:从Gene expression Omnibus数据库中获得牙周炎和胰腺癌组织的miRNA表达数据集。检测相对于正常组织差异表达的mirna,并确定两个数据集的共同mirna。进一步的生物信息学方法被用来探索共同差异表达的mirna与牙周炎和胰腺癌的关系。结果:鉴定出20个共享的、差异表达的mirna;其中14种在两种疾病中表现出相似的表达模式。在这些常见的差异表达mirna中,有10个被发现过表达。hsa-miR-155、hsa-miR-186、hsa-miR-765、hsa-miR-211和hsa-miR-375是基因网络中的顶级miRNA节点,而hsa-miR-155是转录因子网络中唯一的miRNA节点。mirna失调的主要候选基因包括超氧化物歧化酶2 (SOD2)、核FMR1相互作用蛋白2 (NUFIP2)、SFT2结构域2 (SFT2D2)、硫氧还蛋白相互作用蛋白(TXNIP)和细胞周期蛋白D1 (CCND1),而转录失调的主要因子是Argonaute RISC催化组分2 (AGO2)、AKT丝氨酸/苏氨酸激酶1 (AKT1)、BCL6转录抑制因子(BCL6)、断点簇区(BCR)和BRCA1 DNA修复相关(BRCA1)。针对这些疾病的相关化合物出现了,包括5-氟尿嘧啶、吉西他滨、阿霉素、抗坏血酸、己烯雌酚和替莫唑胺。结论:我们的研究提示了将牙周炎与胰腺癌联系起来的候选分子机制,突出了可能针对这两种疾病的潜在化合物。这些发现为指导今后的基础和临床研究奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of Common miRNAs Differentially Expressed in Periodontitis and Pancreatic Cancer.

Background/aim: Periodontitis is a prevalent multifactorial, oral infectious disease and is considered a high-risk factor for pancreatic cancer. Nevertheless, there is limited understanding of the underlying epigenetic mechanisms governing this relationship. The aim of this study was to identify dysregulated miRNAs associated with periodontitis and pancreatic cancer, along with their related genes, signaling pathways, and compounds.

Materials and methods: miRNA expression datasets for tissues affected by periodontitis and pancreatic cancer were obtained from the Gene Expression Omnibus database. miRNAs differentially expressed relative to normal tissues were detected, and those common to both datasets were determined. Further bioinformatics approaches were used to explore the association of common differentially expressed miRNAs with periodontitis and pancreatic cancer.

Results: Twenty shared, differentially expressed miRNAs were identified; 14 exhibited similar expression patterns in both diseases. Among these common differentially expressed miRNAs, 10 were found to be overexpressed. hsa-miR-155, hsa-miR-186, hsa-miR-765, hsa-miR-211 and hsa-miR-375 were the top miRNA nodes in the gene network, with hsa-mir-155 being the sole miRNA node in the transcription factor network. Top candidate miRNA-dysregulated genes included superoxide dismutase 2 (SOD2), nuclear FMR1 interacting protein 2 (NUFIP2), SFT2 domain-containing 2 (SFT2D2), thioredoxin-interacting protein (TXNIP), and cyclin D1 (CCND1), while top dysregulated transcription factors were Argonaute RISC catalytic component 2 (AGO2), AKT serine/threonine kinase 1 (AKT1), BCL6 transcription repressor (BCL6), breakpoint cluster region (BCR), and BRCA1 DNA repair associated (BRCA1). Relevant compounds for targeting these emerged, including 5-fluorouracil, gemcitabine, doxorubicin, ascorbate, diethylstilbestrol, and temozolomide.

Conclusion: Our study suggests candidate molecular mechanisms linking periodontitis to pancreatic cancer, highlighting potential compounds that may target both diseases. These findings provide a foundation for guiding future fundamental and clinical research.

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来源期刊
In vivo
In vivo 医学-医学:研究与实验
CiteScore
4.20
自引率
4.30%
发文量
330
审稿时长
3-8 weeks
期刊介绍: IN VIVO is an international peer-reviewed journal designed to bring together original high quality works and reviews on experimental and clinical biomedical research within the frames of physiology, pathology and disease management. The topics of IN VIVO include: 1. Experimental development and application of new diagnostic and therapeutic procedures; 2. Pharmacological and toxicological evaluation of new drugs, drug combinations and drug delivery systems; 3. Clinical trials; 4. Development and characterization of models of biomedical research; 5. Cancer diagnosis and treatment; 6. Immunotherapy and vaccines; 7. Radiotherapy, Imaging; 8. Tissue engineering, Regenerative medicine; 9. Carcinogenesis.
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