用锁定核酸探针qPCR方法鉴定小圆蝽(鞘翅目:bupresdae)的分子结构

IF 1.7 3区 农林科学 Q2 ENTOMOLOGY
Domenico Rizzo, Francesco Pecori, Michela Moriconi, Claudia Gabriela Zubieta, Bruno Palmigiano, Linda Bartolini, Alice Downes, Chiara Ranaldi, Viola Papini, Nicola Luchi, Alberto Santini
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引用次数: 0

摘要

本研究建立了一种基于qPCR-LNA(锁定核酸)探针的生物分子诊断方法,用于鉴定成虫中的褐家蚕(鞘翅目:bupresdae)。新方案的性能也评价了间接诊断昆虫存在于人工污染的杂草。所设计的引物和探针能够在计算机上区分所有的焦虑豚鼠样本和非目标物种,与GenBank数据库中发现的同源序列100%匹配。该方法灵敏、特异、重复性好。结果表明,该方法对焦耳成虫的分析灵敏度(检出限)为6.4 fg/μL,对人工污染焦耳的分析灵敏度为0.08 pg/μL。这种分析eDNA样本的方法,将允许在昆虫造成重大影响之前,在一个地区早期发现这种昆虫。eDNA分析已成为植物检疫服务空间调查项目中越来越常用的工具,在有害生物监测中具有决定性作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Molecular Identification of Agrilus anxius (Coleoptera: Buprestidae) Using a qPCR Assay With Locked Nucleic Acid (LNA) Probe

Molecular Identification of Agrilus anxius (Coleoptera: Buprestidae) Using a qPCR Assay With Locked Nucleic Acid (LNA) Probe

In the present study, a biomolecular diagnostic assay based on qPCR-LNA (Locked Nucleic Acid) probes was developed for the identification of Agrilus anxius (Coleoptera: Buprestidae) from adult insects. The performance of the new protocol was also evaluated for indirect diagnosis of the insect's presence on artificially contaminated frass. The designed primer and probe were able to distinguish in silico all A. anxius samples from nontarget species, with a 100% match with homologous sequences found in GenBank databases. The molecular assay was sensitive, specific and repeatable. The analytical sensitivity (limit of detection—LoD) for A. anxius adults and artificially contaminated frass was 6.4 fg/μL and 0.08 pg/μL, respectively. This assay, by analysing eDNA samples, will allow the insect's early detection in an area before it has caused major impact. eDNA analysis is becoming an increasingly used tool in the spatial survey programs of phytosanitary services and could play a decisive role in pest surveillance.

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来源期刊
CiteScore
3.40
自引率
5.30%
发文量
132
审稿时长
6 months
期刊介绍: The Journal of Applied Entomology publishes original articles on current research in applied entomology, including mites and spiders in terrestrial ecosystems. Submit your next manuscript for rapid publication: the average time is currently 6 months from submission to publication. With Journal of Applied Entomology''s dynamic article-by-article publication process, Early View, fully peer-reviewed and type-set articles are published online as soon as they complete, without waiting for full issue compilation.
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