RGBChem:用于化学性质预测的类图像表示。

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL
Rafał Stottko,Radosław Michalski,Bartłomiej M Szyja
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引用次数: 0

摘要

在这项工作中,我们引入了RGBChem,这是一种将化合物转换为图像表示的新方法,随后用于训练卷积神经网络(CNN)来预测QM9数据库中化合物的HOMO-LUMO间隙。通过修改用于生成这些图像的.xyz文件中存在的任意原子顺序,已经证明可以通过从单个分子创建多个独特的图像(数据点)来扩展初始训练集的大小。这项研究表明,所提出的方法在统计学上显著提高了模型的准确性,突出了RGBChem是在可用数据集太小而无法有效应用机器学习方法的情况下利用机器学习(ML)的强大方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
RGBChem: Image-Like Representation of Chemical Compounds for Property Prediction.
In this work, we introduce RGBChem, a novel approach for converting chemical compounds into image representations, which are subsequently used to train a convolutional neural network (CNN) to predict the HOMO-LUMO gap for compounds from the QM9 database. By modifying the arbitrary order of atoms present in .xyz files used to generate these images, it has been demonstrated that expanding the initial training set size can be achieved by creating multiple unique images (data points) from a single molecule. This study shows that the presented approach leads to a statistically significant improvement in model accuracy, highlighting RGBChem as a powerful approach for leveraging machine learning (ML) in scenarios where the available data set is too small to apply ML methods effectively.
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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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