机器学习方法3×4米勒偏振仪完全重建诊断的生物组织的偏振图像。

Sooyong Chae;Tongyu Huang;Omar Rodríguez-Núñez;Théotim Lucas;Jean-Charles Vanel;Jérémy Vizet;Angelo Pierangelo;Gennadii Piavchenko;Tsanislava Genova;Ajmal Ajmal;Jessica C. Ramella-Roman;Alexander Doronin;Hui Ma;Tatiana Novikova
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摘要

成像穆勒偏振法的临床实践的翻译往往阻碍了大占地面积和现有仪器相对较慢的采集速度。使用偏振敏感相机作为检测器可以减小仪器尺寸并允许以视频速率传输数据。然而,只有一个完整的4×4 Mueller矩阵的前三行可以被测量。为了克服这个障碍,我们开发了一种机器学习方法,使用顺序神经网络算法从前三行测量的元素中重建Mueller矩阵的缺失元素。该算法在不同波长(550 nm和385 nm)下,用两种不同成像的Mueller偏振仪分别在反射(宽视场成像系统)或透射(显微镜)配置下获得的各种切除人体组织(宫颈、结肠、皮肤、大脑)的偏振图像数据集上进行了训练和测试。使用各种误差指标评估重建性能,所有这些都证实了低误差值。通过GPU并行化和增加批处理大小,Mueller矩阵第四行全图像的重构时间小于50毫秒。这表明,采用并行处理所有图像像素的机器学习方法,结合以视频速率工作的部分穆勒偏振光计,可以有效地替代完整的穆勒偏振光计,并生成生物组织的去极化、线延迟和光轴方向的精确地图,可用于临床环境中的医学诊断。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Machine Learning Approach to 3×4 Mueller Polarimetry for Complete Reconstruction of Diagnostic Polarimetric Images of Biological Tissues
The translation of imaging Mueller polarimetry to clinical practice is often hindered by large footprint and relatively slow acquisition speed of the existing instruments. Using polarization-sensitive camera as a detector may reduce instrument dimensions and allow data streaming at video rate. However, only the first three rows of a complete ${4}\times {4}$ Mueller matrix can be measured. To overcome this hurdle we developed a machine learning approach using sequential neural network algorithm for the reconstruction of missing elements of a Mueller matrix from the measured elements of the first three rows. The algorithm was trained and tested on the dataset of polarimetric images of various excised human tissues (uterine cervix, colon, skin, brain) acquired with two different imaging Mueller polarimeters operating in either reflection (wide-field imaging system) or transmission (microscope) configurations at different wavelengths of 550 nm and 385 nm, respectively. Reconstruction performance was evaluated using various error metrics, all of which confirmed low error values. The reconstruction of full images of the fourth row of Mueller matrix with GPU parallelization and increasing batch size took less than 50 milliseconds. It suggests that a machine learning approach with parallel processing of all image pixels combined with the partial Mueller polarimeter operating at video rate can effectively substitute for the complete Mueller polarimeter and produce accurate maps of depolarization, linear retardance and orientation of the optical axis of biological tissues, which can be used for medical diagnosis in clinical settings.
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