Bashir Sbaiti, Jonathan D. Schultz, Kelsey A. Parker, David N. Beratan
{"title":"用于视频分类的机器学习能够从模拟时间演变的多维光谱中量化分子间耦合","authors":"Bashir Sbaiti, Jonathan D. Schultz, Kelsey A. Parker, David N. Beratan","doi":"10.1021/acs.jpclett.5c00588","DOIUrl":null,"url":null,"abstract":"Signals in two-dimensional electronic spectroscopy (2DES) encode information about electronic, vibrational, and vibronic couplings in molecular structures. However, chemical information is often difficult to extract. Here, we use a (2+1)-dimensional convolutional neural network ((2+1)D-CNN) to map simulated 2DES spectra to their underlying electronic couplings. The (2+1)D-CNN approach, in contrast to lower-dimensional network architectures, can access all of the time and frequency dimensions in the 2DES signal. We find that the (2+1)D-CNN algorithm classifies regimes of Coulombic couplings in dimers with a 10-fold cross-validation accuracy of (96.2 ± 1.0)%. By examining the optimized filters within the CNN, we find that the (2+1)D-CNN learns from frequency-domain peaks in 2DES spectra and their time evolution (including quantum beating). We also generate and analyze class-activation maps (CAMs) to reveal which features of the spectroscopic data are most important for the (2+1)D-CNN classifications. These studies provide an ML approach to address inverse problems in multidimensional spectroscopy and provide strategies to better understand how chemical information is encoded in spectroscopic data.","PeriodicalId":62,"journal":{"name":"The Journal of Physical Chemistry Letters","volume":"56 1","pages":"4707-4714"},"PeriodicalIF":4.8000,"publicationDate":"2025-05-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Machine Learning for Video Classification Enables Quantifying Intermolecular Couplings from Simulated Time-Evolved Multidimensional Spectra\",\"authors\":\"Bashir Sbaiti, Jonathan D. Schultz, Kelsey A. Parker, David N. Beratan\",\"doi\":\"10.1021/acs.jpclett.5c00588\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Signals in two-dimensional electronic spectroscopy (2DES) encode information about electronic, vibrational, and vibronic couplings in molecular structures. However, chemical information is often difficult to extract. Here, we use a (2+1)-dimensional convolutional neural network ((2+1)D-CNN) to map simulated 2DES spectra to their underlying electronic couplings. The (2+1)D-CNN approach, in contrast to lower-dimensional network architectures, can access all of the time and frequency dimensions in the 2DES signal. We find that the (2+1)D-CNN algorithm classifies regimes of Coulombic couplings in dimers with a 10-fold cross-validation accuracy of (96.2 ± 1.0)%. By examining the optimized filters within the CNN, we find that the (2+1)D-CNN learns from frequency-domain peaks in 2DES spectra and their time evolution (including quantum beating). We also generate and analyze class-activation maps (CAMs) to reveal which features of the spectroscopic data are most important for the (2+1)D-CNN classifications. These studies provide an ML approach to address inverse problems in multidimensional spectroscopy and provide strategies to better understand how chemical information is encoded in spectroscopic data.\",\"PeriodicalId\":62,\"journal\":{\"name\":\"The Journal of Physical Chemistry Letters\",\"volume\":\"56 1\",\"pages\":\"4707-4714\"},\"PeriodicalIF\":4.8000,\"publicationDate\":\"2025-05-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The Journal of Physical Chemistry Letters\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jpclett.5c00588\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry Letters","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpclett.5c00588","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Machine Learning for Video Classification Enables Quantifying Intermolecular Couplings from Simulated Time-Evolved Multidimensional Spectra
Signals in two-dimensional electronic spectroscopy (2DES) encode information about electronic, vibrational, and vibronic couplings in molecular structures. However, chemical information is often difficult to extract. Here, we use a (2+1)-dimensional convolutional neural network ((2+1)D-CNN) to map simulated 2DES spectra to their underlying electronic couplings. The (2+1)D-CNN approach, in contrast to lower-dimensional network architectures, can access all of the time and frequency dimensions in the 2DES signal. We find that the (2+1)D-CNN algorithm classifies regimes of Coulombic couplings in dimers with a 10-fold cross-validation accuracy of (96.2 ± 1.0)%. By examining the optimized filters within the CNN, we find that the (2+1)D-CNN learns from frequency-domain peaks in 2DES spectra and their time evolution (including quantum beating). We also generate and analyze class-activation maps (CAMs) to reveal which features of the spectroscopic data are most important for the (2+1)D-CNN classifications. These studies provide an ML approach to address inverse problems in multidimensional spectroscopy and provide strategies to better understand how chemical information is encoded in spectroscopic data.
期刊介绍:
The Journal of Physical Chemistry (JPC) Letters is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, chemical physicists, physicists, material scientists, and engineers. An important criterion for acceptance is that the paper reports a significant scientific advance and/or physical insight such that rapid publication is essential. Two issues of JPC Letters are published each month.