大流量数据的分布式并行正交/动态模态分解

IF 7.2 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Vilas Shinde
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引用次数: 0

摘要

高保真计算流体动力学(CFD)模拟产生大型数据库,这些数据库通常存储在集中式或分布式机器上。特征值/奇异值分解是一些早期和最有用的分解。流体流动的固有正交分解(POD)和动力学模态分解(DMD)本质上是基于特征/奇异值分解算法。虽然存在非常高效和并行的特征/奇异值求解器,但它们中的大多数在处理大数据时表现不佳,特别是在分布式设置中,并且通常诉诸于特征/奇异值谱的部分估计。在本文中,我们提出了一种在分布式并行环境下的高内存效率和高可扩展性的POD和DMD程序,其中并行DMD算法是一种改进的高瘦QR (TSQR) DMD算法。利用基于来流边界层厚度、马赫数为2.7、雷诺数为54,600的全湍流激波边界层相互作用(SBLI)的大涡模拟(LES)数据库,首先评估了算法的性能和准确性,其次阐明了POD/DMD下SBLI的一些三维相干流动特征。所选择的LES流场POD/DMD模式显示出完整的3D流动特征,例如,与SBLI动力学物理相关的顺流细长Görtler-like漩涡和高频声波包。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Distributed-parallel proper orthogonal/dynamic mode decompositions of large flow data
High-fidelity computational fluid dynamics (CFD) simulations produce large databases, which are typically stored on either centralized or distributed machines. Eigen/Singular value decompositions are some of the early-stage and most useful decompositions. The more popular proper orthogonal decomposition (POD) and dynamics mode decomposition (DMD) of fluid flows are essentially based on the eigen/singular value decomposition algorithms. Although there exist very efficient and parallel eigen/singular value solvers, most of them perform poorly when handling large data particularly in distributed settings, and often resort to a partial estimation of eigen/singular value spectra. In this paper, we present a memory-efficient and highly-scalable POD and DMD procedures in distributed-parallel settings, where the parallel DMD algorithm is an improved tall-and-skinny QR (TSQR) DMD algorithm. A Large Eddy Simulations (LES) database of a fully turbulent Shock Wave Boundary Layer Interaction (SBLI) at Mach 2.7 and Reynolds number of 54,600 based on the inflow boundary layer thickness is employed, first, to evaluate the performance and accuracy of the algorithms, and second, to elucidate some of the three-dimensional coherent flow features of the SBLI pertaining to POD/DMD. The selected POD/DMD modes of the LES flowfields exhibit full 3D flow features, such as, the streamwise-elongated Görtler-like vortices and high-frequency acoustic packets that are physically relevant to the SBLI dynamics.
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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