{"title":"大流量数据的分布式并行正交/动态模态分解","authors":"Vilas Shinde","doi":"10.1016/j.cpc.2025.109644","DOIUrl":null,"url":null,"abstract":"<div><div>High-fidelity computational fluid dynamics (CFD) simulations produce large databases, which are typically stored on either centralized or distributed machines. Eigen/Singular value decompositions are some of the early-stage and most useful decompositions. The more popular proper orthogonal decomposition (POD) and dynamics mode decomposition (DMD) of fluid flows are essentially based on the eigen/singular value decomposition algorithms. Although there exist very efficient and parallel eigen/singular value solvers, most of them perform poorly when handling large data particularly in distributed settings, and often resort to a partial estimation of eigen/singular value spectra. In this paper, we present a memory-efficient and highly-scalable POD and DMD procedures in distributed-parallel settings, where the parallel DMD algorithm is an improved tall-and-skinny QR (TSQR) DMD algorithm. A Large Eddy Simulations (LES) database of a fully turbulent Shock Wave Boundary Layer Interaction (SBLI) at Mach 2.7 and Reynolds number of <span><math><mn>54</mn><mo>,</mo><mn>600</mn></math></span> based on the inflow boundary layer thickness is employed, first, to evaluate the performance and accuracy of the algorithms, and second, to elucidate some of the three-dimensional coherent flow features of the SBLI pertaining to POD/DMD. The selected POD/DMD modes of the LES flowfields exhibit full 3D flow features, such as, the streamwise-elongated Görtler-like vortices and high-frequency acoustic packets that are physically relevant to the SBLI dynamics.</div></div>","PeriodicalId":285,"journal":{"name":"Computer Physics Communications","volume":"313 ","pages":"Article 109644"},"PeriodicalIF":7.2000,"publicationDate":"2025-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Distributed-parallel proper orthogonal/dynamic mode decompositions of large flow data\",\"authors\":\"Vilas Shinde\",\"doi\":\"10.1016/j.cpc.2025.109644\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>High-fidelity computational fluid dynamics (CFD) simulations produce large databases, which are typically stored on either centralized or distributed machines. Eigen/Singular value decompositions are some of the early-stage and most useful decompositions. The more popular proper orthogonal decomposition (POD) and dynamics mode decomposition (DMD) of fluid flows are essentially based on the eigen/singular value decomposition algorithms. Although there exist very efficient and parallel eigen/singular value solvers, most of them perform poorly when handling large data particularly in distributed settings, and often resort to a partial estimation of eigen/singular value spectra. In this paper, we present a memory-efficient and highly-scalable POD and DMD procedures in distributed-parallel settings, where the parallel DMD algorithm is an improved tall-and-skinny QR (TSQR) DMD algorithm. A Large Eddy Simulations (LES) database of a fully turbulent Shock Wave Boundary Layer Interaction (SBLI) at Mach 2.7 and Reynolds number of <span><math><mn>54</mn><mo>,</mo><mn>600</mn></math></span> based on the inflow boundary layer thickness is employed, first, to evaluate the performance and accuracy of the algorithms, and second, to elucidate some of the three-dimensional coherent flow features of the SBLI pertaining to POD/DMD. The selected POD/DMD modes of the LES flowfields exhibit full 3D flow features, such as, the streamwise-elongated Görtler-like vortices and high-frequency acoustic packets that are physically relevant to the SBLI dynamics.</div></div>\",\"PeriodicalId\":285,\"journal\":{\"name\":\"Computer Physics Communications\",\"volume\":\"313 \",\"pages\":\"Article 109644\"},\"PeriodicalIF\":7.2000,\"publicationDate\":\"2025-05-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer Physics Communications\",\"FirstCategoryId\":\"101\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0010465525001468\",\"RegionNum\":2,\"RegionCategory\":\"物理与天体物理\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Physics Communications","FirstCategoryId":"101","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0010465525001468","RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Distributed-parallel proper orthogonal/dynamic mode decompositions of large flow data
High-fidelity computational fluid dynamics (CFD) simulations produce large databases, which are typically stored on either centralized or distributed machines. Eigen/Singular value decompositions are some of the early-stage and most useful decompositions. The more popular proper orthogonal decomposition (POD) and dynamics mode decomposition (DMD) of fluid flows are essentially based on the eigen/singular value decomposition algorithms. Although there exist very efficient and parallel eigen/singular value solvers, most of them perform poorly when handling large data particularly in distributed settings, and often resort to a partial estimation of eigen/singular value spectra. In this paper, we present a memory-efficient and highly-scalable POD and DMD procedures in distributed-parallel settings, where the parallel DMD algorithm is an improved tall-and-skinny QR (TSQR) DMD algorithm. A Large Eddy Simulations (LES) database of a fully turbulent Shock Wave Boundary Layer Interaction (SBLI) at Mach 2.7 and Reynolds number of based on the inflow boundary layer thickness is employed, first, to evaluate the performance and accuracy of the algorithms, and second, to elucidate some of the three-dimensional coherent flow features of the SBLI pertaining to POD/DMD. The selected POD/DMD modes of the LES flowfields exhibit full 3D flow features, such as, the streamwise-elongated Görtler-like vortices and high-frequency acoustic packets that are physically relevant to the SBLI dynamics.
期刊介绍:
The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper.
Computer Programs in Physics (CPiP)
These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged.
Computational Physics Papers (CP)
These are research papers in, but are not limited to, the following themes across computational physics and related disciplines.
mathematical and numerical methods and algorithms;
computational models including those associated with the design, control and analysis of experiments; and
algebraic computation.
Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.