鉴定与阻塞性睡眠呼吸暂停综合征相关的线粒体能量代谢基因:综合生物信息学分析

IF 7.7 1区 化学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ying Jiang, Junhong Chen, Xiaofang Du, Ling Xiao, Hong Jiang, Fan Wang, Bing Wang
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引用次数: 0

摘要

阻塞性睡眠呼吸暂停综合征(Obstructive sleep apnea syndrome, OSAS)是近年来出现的一种常见的睡眠障碍,与线粒体能量代谢异常密切相关。通过分析OSAS的基因表达数据,我们鉴定出与线粒体能量代谢相关的差异表达基因(differential expression genes, DEGs),并进一步探讨NDUFA10在OSAS中的功能及其潜在的诊断价值。在本文中,我们从公共数据库中下载OSAS相关表达数据,并使用标准化流程对数据集进行预处理。基因集富集分析(GSEA)用于评估与线粒体代谢相关的途径,并构建诊断模型来评估关键基因的表达。对常见线粒体能量代谢相关差异表达基因(Co-MEMRDEGs)进行ROC曲线分析,构建基因相互作用网络。经过数据标准化,鉴定出显著差异表达的基因,其中NDUFA10被鉴定为与OSAS最相关的基因之一。构建的诊断模型预测准确率较高,ROC曲线分析进一步验证了其临床诊断潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of mitochondrial energy metabolism genes associated with obstructive sleep apnea syndrome: integrated bioinformatics analysis
Obstructive sleep apnea syndrome (OSAS) is a common sleep disorder, which is closely related to abnormal mitochondrial energy metabolism in recent years. By analyzing gene expression data of OSAS, we identified differentially expressed genes (DEGs) related to mitochondrial energy metabolism, and further explored the function of NDUFA10 in OSAS and its potential diagnostic value. In this paper, we download OSAS related expression data from a public database and preprocess the data set using a standardized process. Gene set enrichment analysis (GSEA) was used to assess pathways associated with mitochondrial metabolism, and diagnostic models were constructed to assess the expression of key genes. ROC curve analysis was performed for common mitochondrial energy metabolism-related differentially expressed genes (Co-MEMRDEGs) and gene interaction networks were constructed. After data standardization, significantly differentially expressed genes were identified, among which NDUFA10 was identified as one of the genes most associated with OSAS. The constructed diagnostic model showed good prediction accuracy, and ROC curve analysis further verified its clinical diagnostic potential.
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来源期刊
International Journal of Biological Macromolecules
International Journal of Biological Macromolecules 生物-生化与分子生物学
CiteScore
13.70
自引率
9.80%
发文量
2728
审稿时长
64 days
期刊介绍: The International Journal of Biological Macromolecules is a well-established international journal dedicated to research on the chemical and biological aspects of natural macromolecules. Focusing on proteins, macromolecular carbohydrates, glycoproteins, proteoglycans, lignins, biological poly-acids, and nucleic acids, the journal presents the latest findings in molecular structure, properties, biological activities, interactions, modifications, and functional properties. Papers must offer new and novel insights, encompassing related model systems, structural conformational studies, theoretical developments, and analytical techniques. Each paper is required to primarily focus on at least one named biological macromolecule, reflected in the title, abstract, and text.
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