{"title":"HMOX1作为糖脂代谢紊乱和T2DM的新生物标志物:系统生物信息学研究和实验验证","authors":"Qi Xu, Hongrong Zhang, Nuobing Ruan, Jiawen Jing, Yufan Li, Jindong Zhao* and Zhaohui Fang*, ","doi":"10.1021/acsomega.4c0966210.1021/acsomega.4c09662","DOIUrl":null,"url":null,"abstract":"<p >Type 2 diabetes mellitus (T2DM) has led to a considerable increase in morbidity and mortality worldwide. Current treatments control blood glucose but cannot reverse the disease, making it important to identify biomarkers that predict T2DM onset and progression. This study explores heme oxygenase 1(HMOX1) as a novel biomarker for T2DM through bioinformatics and experimental validation. Core differentially expressed genes (DEGs) were identified using the Gene Expression Omnibus database, with Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Gene Set Enrichment Analysis analyses revealing notable pathways, including Toll-like receptor signaling and cytokine receptor interactions. A Nomogram model and receiver operating characteristic curves demonstrated strong diagnostic effectiveness for these core DEGs. The CIBERSORT algorithm assessed the relation between core DEGs and immune cell infiltration, showing substantial associations with several immune cell types, particularly highlighting HMOX1’s correlation with eight immune cells (<i>p</i> < 0.05). In a mouse model, db/db mice displayed typical diabetic characteristics and lower serum HMOX1 levels compared to db/m controls (<i>p</i> < 0.01). Histological analysis confirmed liver damage and decreased expression of NFE2L2 and HMOX1 in diabetic mice tissues (<i>p</i> < 0.05). HMOX1 is identified as a promising biomarker for T2DM, with its downregulation confirmed through bioinformatics and experimental methods.</p>","PeriodicalId":22,"journal":{"name":"ACS Omega","volume":"10 16","pages":"16123–16137 16123–16137"},"PeriodicalIF":4.3000,"publicationDate":"2025-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.acs.org/doi/epdf/10.1021/acsomega.4c09662","citationCount":"0","resultStr":"{\"title\":\"HMOX1 as a Novel Biomarker for Glucose–Lipid Metabolism Disorder and T2DM: Systematic Bioinformatics Investigation and Experimental Verification\",\"authors\":\"Qi Xu, Hongrong Zhang, Nuobing Ruan, Jiawen Jing, Yufan Li, Jindong Zhao* and Zhaohui Fang*, \",\"doi\":\"10.1021/acsomega.4c0966210.1021/acsomega.4c09662\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Type 2 diabetes mellitus (T2DM) has led to a considerable increase in morbidity and mortality worldwide. Current treatments control blood glucose but cannot reverse the disease, making it important to identify biomarkers that predict T2DM onset and progression. This study explores heme oxygenase 1(HMOX1) as a novel biomarker for T2DM through bioinformatics and experimental validation. Core differentially expressed genes (DEGs) were identified using the Gene Expression Omnibus database, with Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Gene Set Enrichment Analysis analyses revealing notable pathways, including Toll-like receptor signaling and cytokine receptor interactions. A Nomogram model and receiver operating characteristic curves demonstrated strong diagnostic effectiveness for these core DEGs. The CIBERSORT algorithm assessed the relation between core DEGs and immune cell infiltration, showing substantial associations with several immune cell types, particularly highlighting HMOX1’s correlation with eight immune cells (<i>p</i> < 0.05). In a mouse model, db/db mice displayed typical diabetic characteristics and lower serum HMOX1 levels compared to db/m controls (<i>p</i> < 0.01). Histological analysis confirmed liver damage and decreased expression of NFE2L2 and HMOX1 in diabetic mice tissues (<i>p</i> < 0.05). HMOX1 is identified as a promising biomarker for T2DM, with its downregulation confirmed through bioinformatics and experimental methods.</p>\",\"PeriodicalId\":22,\"journal\":{\"name\":\"ACS Omega\",\"volume\":\"10 16\",\"pages\":\"16123–16137 16123–16137\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2025-04-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://pubs.acs.org/doi/epdf/10.1021/acsomega.4c09662\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Omega\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://pubs.acs.org/doi/10.1021/acsomega.4c09662\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Omega","FirstCategoryId":"92","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acsomega.4c09662","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
摘要
2型糖尿病(T2DM)已导致世界范围内发病率和死亡率的显著增加。目前的治疗方法可以控制血糖,但不能逆转疾病,因此确定预测T2DM发病和进展的生物标志物非常重要。本研究通过生物信息学和实验验证,探索血红素加氧酶1(HMOX1)作为T2DM的新型生物标志物。通过Gene Expression Omnibus数据库、Gene Ontology、京都基因与基因组百科全书和Gene Set Enrichment Analysis分析,发现了包括toll样受体信号传导和细胞因子受体相互作用在内的显著途径,鉴定了核心差异表达基因(deg)。Nomogram模型和受试者工作特征曲线显示了对这些核心deg的诊断效果。CIBERSORT算法评估了核心deg与免疫细胞浸润之间的关系,显示出与几种免疫细胞类型的实质关联,特别突出了HMOX1与八种免疫细胞的相关性(p <;0.05)。在小鼠模型中,db/db小鼠表现出典型的糖尿病特征,与db/m对照组相比,血清HMOX1水平较低(p <;0.01)。组织学分析证实糖尿病小鼠肝损伤,NFE2L2和HMOX1表达降低(p <;0.05)。HMOX1被认为是T2DM的一个有前景的生物标志物,通过生物信息学和实验方法证实其下调。
HMOX1 as a Novel Biomarker for Glucose–Lipid Metabolism Disorder and T2DM: Systematic Bioinformatics Investigation and Experimental Verification
Type 2 diabetes mellitus (T2DM) has led to a considerable increase in morbidity and mortality worldwide. Current treatments control blood glucose but cannot reverse the disease, making it important to identify biomarkers that predict T2DM onset and progression. This study explores heme oxygenase 1(HMOX1) as a novel biomarker for T2DM through bioinformatics and experimental validation. Core differentially expressed genes (DEGs) were identified using the Gene Expression Omnibus database, with Gene Ontology, Kyoto Encyclopedia of Genes and Genomes, and Gene Set Enrichment Analysis analyses revealing notable pathways, including Toll-like receptor signaling and cytokine receptor interactions. A Nomogram model and receiver operating characteristic curves demonstrated strong diagnostic effectiveness for these core DEGs. The CIBERSORT algorithm assessed the relation between core DEGs and immune cell infiltration, showing substantial associations with several immune cell types, particularly highlighting HMOX1’s correlation with eight immune cells (p < 0.05). In a mouse model, db/db mice displayed typical diabetic characteristics and lower serum HMOX1 levels compared to db/m controls (p < 0.01). Histological analysis confirmed liver damage and decreased expression of NFE2L2 and HMOX1 in diabetic mice tissues (p < 0.05). HMOX1 is identified as a promising biomarker for T2DM, with its downregulation confirmed through bioinformatics and experimental methods.
ACS OmegaChemical Engineering-General Chemical Engineering
CiteScore
6.60
自引率
4.90%
发文量
3945
审稿时长
2.4 months
期刊介绍:
ACS Omega is an open-access global publication for scientific articles that describe new findings in chemistry and interfacing areas of science, without any perceived evaluation of immediate impact.