芦荟素作为潜在的抗乳腺癌药物:来自分子对接和密度泛函理论(DFT)分析的见解

IF 2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Aqsa Laraib, Shafiq UrRehman, Saba Jamil, Muhammad Anjum Zia, Shabbir Muhammad, Shamsa Bibi, Noman Ali, Mehboob Hassan, Muhammad Umar Nadeem, Fu-Quan Bai
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引用次数: 0

摘要

乳腺癌是世界上妇女死亡的主要原因之一。本研究的基本目的是通过对接分析和计算研究,确定芦荟素与6种乳腺癌受体蛋白的结构稳定性,以确保其抗癌能力。密度泛函理论(DFT)利用6-311 ++G (d,p)基集和B3LYP方法对分子几何结构进行了优化。FMO分析发现LUMO和HOMO之间存在4.61 eV的能隙,影响了靶受体蛋白对接过程中的相互作用。芦荟素的分子静电电位(MEP)颜色分级范围为- 7.246 ~ 7.246 e−2 (a.u)。为了确定通过芦荟的电荷转移,进行了Mulliken电荷分析。通过PROCHECK进行的蛋白验证分析表明,在所有受体蛋白中,AKT1蛋白和EGFR蛋白较强。对接分析确定了芦荟素与EGFR、GSK3β、AKT1、BRCA2、P38α和PDK1的结合评分。受体EGFR与配体的结合亲和力为−9.1 kcal/mol。另一方面,BRCA2和P38α与芦荟素表现出最好的氢键相互作用。此外,使用pkCSM在线数据库进行的ADMET分析表明,芦荟素可能表现出最高的肠道吸收率和良好的总清除率。从计算和对接结果来看,芦荟素可能通过靶向这些受体蛋白在乳腺癌细胞中发挥良好的乳腺癌抑制剂作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Aloin as a Potential Anti-Breast Cancer Agent: Insights From Molecular Docking and Density Functional Theory (DFT) Analysis

Aloin as a Potential Anti-Breast Cancer Agent: Insights From Molecular Docking and Density Functional Theory (DFT) Analysis

Breast Cancer is one of the main causes of death in the world among women. The basic purpose of this research is to determine the structural stability of aloin with six breast cancer-causing receptor proteins to ensure its anticancer capability using docking analysis and computational studies. Density function theory (DFT) has optimized the molecular geometry with the 6–311++G (d,p) basis set and B3LYP method. FMO analysis has identified the energy gap of 4.61 eV between LUMO and HOMO that influenced the interactions during the docking of target receptor proteins. The electrophilic and nucleophilic regions were observed with the molecular electrostatic potential (MEP) color grading of aloin ranges from −7.246 to 7.246 e−2 (a.u.). To determine the charge transfer across the aloin, a Mulliken charge analysis was performed. Protein validation analysis conducted through PROCHECK suggests that protein AKT1 and EGFR are stronger among all receptor proteins. The docking analysis determined the binding scores of aloin with EGFR, GSK3β, AKT1, BRCA2, P38α, and PDK1. The receptor EGFR showed the best binding affinity of −9.1 kcal/mol with the ligand. On the other hand, BRCA2 and P38α showed the best hydrogen bonding interactions with aloin. Furthermore, the ADMET analysis conducted using the pkCSM online database indicated that aloin is likely to demonstrate the highest intestinal absorption and a favorable total clearance rate. From the computational and docking results, it is suggested that the aloin may act as a good inhibitor against breast cancer by targeting these receptor proteins in breast cancer cells.

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来源期刊
ChemistrySelect
ChemistrySelect Chemistry-General Chemistry
CiteScore
3.30
自引率
4.80%
发文量
1809
审稿时长
1.6 months
期刊介绍: ChemistrySelect is the latest journal from ChemPubSoc Europe and Wiley-VCH. It offers researchers a quality society-owned journal in which to publish their work in all areas of chemistry. Manuscripts are evaluated by active researchers to ensure they add meaningfully to the scientific literature, and those accepted are processed quickly to ensure rapid online publication.
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