改进了皮炎病毒目中与皮炎病毒相关的巨型DNA病毒的分类

IF 2.5 4区 医学 Q3 VIROLOGY
Jean-Michel Claverie, Matthieu Legendre, Sofia Rigou, Chantal Abergel
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引用次数: 0

摘要

Pithoviridae家族的第一个成员(Pithovirus sibericum)于2014年从古西伯利亚永久冻土中分离并鉴定。从那时起,许多亲缘病毒已被分离、鉴定并归类为甲鼻病毒属、甲鼻病毒属和甲鼻病毒属。此外,从元基因组数据(水病毒)中组装了一个完整的环状基因组序列。所有这些病毒都形成独特的巨大细长卵形颗粒,长度可达2微米,但它们在基因组大小、核苷酸组成和基因含量方面存在显著差异。基于它们共享的卵形病毒粒子形状、共同的复制策略和核心基因的相似性,我们最近提出将它们划分在一个新的亚目,即Ocovirineae中三个不同的科(Pithoviridae、Orpheoviridae和Hydriviridae),以明确地将它们与其他更远的科(marseilaviridae、Ascoviridae、Iridoviridae)分开。这一新的分类法在2025年3月举行的最后一次ICTV批准投票中得到了验证,将以前的划分从三个分支扩展到四个分支(包括水合病毒),同时将阿尔法病毒属和阿尔法病毒属保持在同一科,即水合病毒科(但分为两个亚科),因为它们彼此之间的相似性要比与orphev和水合病毒的相似性大得多。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Refining the taxonomy of pithovirus-related giant DNA viruses within the order Pimascovirales

The first member of the family Pithoviridae (Pithovirus sibericum) was isolated from ancient Siberian permafrost and characterized in 2014. Since then, many relatives have been isolated, characterized, and classified as members of the genera Alphapithovirus, Alphacedratvirus, and Alphaorpheovirus. In addition, one complete circular genome sequence was assembled from metagenomic data (hydrivirus). All of these viruses form distinctive giant elongated ovoid particles, up to 2 µm in length, but they differ significantly in the size of their genome, their nucleotide composition, and their gene content. Based on their shared ovoid virion shape, common replication strategy, and core gene similarity, we recently proposed to update their taxonomic status by classifying them in three distinct families (Pithoviridae, Orpheoviridae, and Hydriviridae) within a new suborder, the Ocovirineae, to separate them clearly from the other more distant families (Marseilleviridae, Ascoviridae, Iridoviridae) of the order Pimascovirales. This new taxonomy, validated by the last ICTV Ratification vote held in March 2025, extends the previous partition from three clades to four (to include hydrivirus) while keeping the genera Alphacedratvirus and Alphapithovirus in the same family, Pithoviridae (but split into two subfamilies), due to their much greater similarity to each other than to orpheovirus and hydrivirus.

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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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