Ernst Dennis Larsson,Peter Reinholdt,Jacob Kongsted,Erik Donovan Hedegård
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Exact Two-Component Relativistic Polarizable Density Embedding.
We have implemented the fragment-based polarizable density embedding (PDE) model within a relativistic framework building on the eXact 2-Component (X2C) relativistic Hamiltonian, thereby taking the PDE method to a relativistic framework. The PDE model provides a robust solution to the electron-leakage problem, and we show that this newly implemented model offers an accurate way to model solvated systems possessing significant relativistic effects. To demonstrate the model's performance, we perform comparative calculations of the K- and L2,3-edge spectra of water-solvated cysteine (both protonated and deprotonated) with the X2C Hamiltonian. Particularly, with counterions such as Na+ in the solvent, electron leakage clearly shows in the older polarizable embedding model through spurious peaks in the spectra. However, when the PDE model is employed, these spurious peaks disappear.
期刊介绍:
The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.