Zuzanna Justyna Kozanecka , Jintian Liu , Qiyue Liu , Hannah Buch , Jona Gebauer , Detlev Rasch , Markus Böl , Rainer Krull
{"title":"迷宫肽A1生成的增加与纳米比亚放线菌颗粒的供氧、密度和弹性的变化有关","authors":"Zuzanna Justyna Kozanecka , Jintian Liu , Qiyue Liu , Hannah Buch , Jona Gebauer , Detlev Rasch , Markus Böl , Rainer Krull","doi":"10.1016/j.bej.2025.109747","DOIUrl":null,"url":null,"abstract":"<div><div>Labyrinthopeptin A1, a promising broad-spectrum antiviral, is produced exclusively by the filamentous actinomycete <em>Actinomadura namibiensis</em>. In submerged cultures of <em>A. namibiensis</em>, supplementation with 50 mM ammonium sulfate resulted in a 6.3-fold increase in product formation, accompanied by enhanced glycerol consumption, lower dissolved oxygen tension, and changes in pellet morphology. This study aims to elucidate the underlying mechanisms of this bioprocess intensification method using novel tools such as oxygen microprofiling, plate-plate compression, and sedimentation experiments to investigate pellet characteristics possibly associated with product formation. Oxygen microprofiling revealed steeper profiles in salt-supplemented pellets, indicating heightened metabolic activity and potential oxygen limitation in pellet cores during exponential growth phase, which affects the subsequent secondary metabolite production. For the first time, pellet density was estimated using sedimentation experiments. While control pellets showed no density trends, salt-supplemented pellets became more porous over time, suggesting a link to the increased glycerol uptake during product formation. Additionally, the compression experiments showed greater increase in stiffness in salt-supplemented pellets over time, suggesting the development of stiffer structures within the hyphal network and increased pellet stability. This observation was previously inferred only through image analysis and cell dry weight concentration. Ultimately, the results presented here contribute to the development of numerical simulations and predictive models for the productivity and growth behavior of filamentous pellet cultures in the future.</div></div>","PeriodicalId":8766,"journal":{"name":"Biochemical Engineering Journal","volume":"220 ","pages":"Article 109747"},"PeriodicalIF":3.7000,"publicationDate":"2025-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Increased labyrinthopeptin A1 production is associated with changes in oxygen supply, density and elasticity of Actinomadura namibiensis pellets\",\"authors\":\"Zuzanna Justyna Kozanecka , Jintian Liu , Qiyue Liu , Hannah Buch , Jona Gebauer , Detlev Rasch , Markus Böl , Rainer Krull\",\"doi\":\"10.1016/j.bej.2025.109747\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Labyrinthopeptin A1, a promising broad-spectrum antiviral, is produced exclusively by the filamentous actinomycete <em>Actinomadura namibiensis</em>. In submerged cultures of <em>A. namibiensis</em>, supplementation with 50 mM ammonium sulfate resulted in a 6.3-fold increase in product formation, accompanied by enhanced glycerol consumption, lower dissolved oxygen tension, and changes in pellet morphology. This study aims to elucidate the underlying mechanisms of this bioprocess intensification method using novel tools such as oxygen microprofiling, plate-plate compression, and sedimentation experiments to investigate pellet characteristics possibly associated with product formation. Oxygen microprofiling revealed steeper profiles in salt-supplemented pellets, indicating heightened metabolic activity and potential oxygen limitation in pellet cores during exponential growth phase, which affects the subsequent secondary metabolite production. For the first time, pellet density was estimated using sedimentation experiments. While control pellets showed no density trends, salt-supplemented pellets became more porous over time, suggesting a link to the increased glycerol uptake during product formation. Additionally, the compression experiments showed greater increase in stiffness in salt-supplemented pellets over time, suggesting the development of stiffer structures within the hyphal network and increased pellet stability. This observation was previously inferred only through image analysis and cell dry weight concentration. Ultimately, the results presented here contribute to the development of numerical simulations and predictive models for the productivity and growth behavior of filamentous pellet cultures in the future.</div></div>\",\"PeriodicalId\":8766,\"journal\":{\"name\":\"Biochemical Engineering Journal\",\"volume\":\"220 \",\"pages\":\"Article 109747\"},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2025-04-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biochemical Engineering Journal\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1369703X25001214\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochemical Engineering Journal","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1369703X25001214","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Increased labyrinthopeptin A1 production is associated with changes in oxygen supply, density and elasticity of Actinomadura namibiensis pellets
Labyrinthopeptin A1, a promising broad-spectrum antiviral, is produced exclusively by the filamentous actinomycete Actinomadura namibiensis. In submerged cultures of A. namibiensis, supplementation with 50 mM ammonium sulfate resulted in a 6.3-fold increase in product formation, accompanied by enhanced glycerol consumption, lower dissolved oxygen tension, and changes in pellet morphology. This study aims to elucidate the underlying mechanisms of this bioprocess intensification method using novel tools such as oxygen microprofiling, plate-plate compression, and sedimentation experiments to investigate pellet characteristics possibly associated with product formation. Oxygen microprofiling revealed steeper profiles in salt-supplemented pellets, indicating heightened metabolic activity and potential oxygen limitation in pellet cores during exponential growth phase, which affects the subsequent secondary metabolite production. For the first time, pellet density was estimated using sedimentation experiments. While control pellets showed no density trends, salt-supplemented pellets became more porous over time, suggesting a link to the increased glycerol uptake during product formation. Additionally, the compression experiments showed greater increase in stiffness in salt-supplemented pellets over time, suggesting the development of stiffer structures within the hyphal network and increased pellet stability. This observation was previously inferred only through image analysis and cell dry weight concentration. Ultimately, the results presented here contribute to the development of numerical simulations and predictive models for the productivity and growth behavior of filamentous pellet cultures in the future.
期刊介绍:
The Biochemical Engineering Journal aims to promote progress in the crucial chemical engineering aspects of the development of biological processes associated with everything from raw materials preparation to product recovery relevant to industries as diverse as medical/healthcare, industrial biotechnology, and environmental biotechnology.
The Journal welcomes full length original research papers, short communications, and review papers* in the following research fields:
Biocatalysis (enzyme or microbial) and biotransformations, including immobilized biocatalyst preparation and kinetics
Biosensors and Biodevices including biofabrication and novel fuel cell development
Bioseparations including scale-up and protein refolding/renaturation
Environmental Bioengineering including bioconversion, bioremediation, and microbial fuel cells
Bioreactor Systems including characterization, optimization and scale-up
Bioresources and Biorefinery Engineering including biomass conversion, biofuels, bioenergy, and optimization
Industrial Biotechnology including specialty chemicals, platform chemicals and neutraceuticals
Biomaterials and Tissue Engineering including bioartificial organs, cell encapsulation, and controlled release
Cell Culture Engineering (plant, animal or insect cells) including viral vectors, monoclonal antibodies, recombinant proteins, vaccines, and secondary metabolites
Cell Therapies and Stem Cells including pluripotent, mesenchymal and hematopoietic stem cells; immunotherapies; tissue-specific differentiation; and cryopreservation
Metabolic Engineering, Systems and Synthetic Biology including OMICS, bioinformatics, in silico biology, and metabolic flux analysis
Protein Engineering including enzyme engineering and directed evolution.