Adam J. Wyness , Mauricio Oróstica , Jonathan R. Monsinjon , Christopher D. McQuaid
{"title":"基于 DNA 的帽贝 Patella depressa Pennant 1777 贝壳内石群落演替研究","authors":"Adam J. Wyness , Mauricio Oróstica , Jonathan R. Monsinjon , Christopher D. McQuaid","doi":"10.1016/j.jembe.2025.152103","DOIUrl":null,"url":null,"abstract":"<div><div>Biotic and abiotic calcium carbonate structures are used as a substrate by bioeroding organisms, or euendoliths, worldwide. Euendoliths can have serious ecological effects on living hosts, and with global increases in ocean acidification and warming, the efficiency of erosion by marine euendoliths is likely to increase. Here, we used growth curve data for the limpet <em>Patella depressa</em> and 16S rRNA sequencing to explore succession in the endolithic community on the shells of <em>P. depressa</em> throughout its range across Great Britain. Limpet age correlated well with the extent of erosion within sites, but differed among sites, with those at the centre of the host range showing greater erosion when corrected for age. Alpha-diversity and richness of cyanobacteria decreased with the extent of erosion, particularly during the earlier stages of erosion. A decrease in the accumulation rate of Amplicon Sequence Variants (ASVs) occurred at around 80 % of cumulative ASVs, at a shell age of between 1.4 and 2.7 years. Cyanobacterial community composition differed among the shells from the different sites, but despite these differences, there were no discernable patterns in the abundance of specific taxa that were associated with limpet age or the extent of erosion. The results revealed that, when examined at a high taxonomic resolution, cyanobacterial community succession is more complex than previously thought, and may be site-specific. However, the trends observed indicate that cyanobacterial community succession occurs on calcifying organisms <em>in vivo</em>, with a shift towards a climax community after 1.4–2.7 years for <em>P. depressa</em>.</div></div>","PeriodicalId":50197,"journal":{"name":"Journal of Experimental Marine Biology and Ecology","volume":"587 ","pages":"Article 152103"},"PeriodicalIF":1.8000,"publicationDate":"2025-04-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A DNA-based investigation of endolithic community succession on shells of the limpet Patella depressa Pennant 1777\",\"authors\":\"Adam J. Wyness , Mauricio Oróstica , Jonathan R. Monsinjon , Christopher D. McQuaid\",\"doi\":\"10.1016/j.jembe.2025.152103\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Biotic and abiotic calcium carbonate structures are used as a substrate by bioeroding organisms, or euendoliths, worldwide. Euendoliths can have serious ecological effects on living hosts, and with global increases in ocean acidification and warming, the efficiency of erosion by marine euendoliths is likely to increase. Here, we used growth curve data for the limpet <em>Patella depressa</em> and 16S rRNA sequencing to explore succession in the endolithic community on the shells of <em>P. depressa</em> throughout its range across Great Britain. Limpet age correlated well with the extent of erosion within sites, but differed among sites, with those at the centre of the host range showing greater erosion when corrected for age. Alpha-diversity and richness of cyanobacteria decreased with the extent of erosion, particularly during the earlier stages of erosion. A decrease in the accumulation rate of Amplicon Sequence Variants (ASVs) occurred at around 80 % of cumulative ASVs, at a shell age of between 1.4 and 2.7 years. Cyanobacterial community composition differed among the shells from the different sites, but despite these differences, there were no discernable patterns in the abundance of specific taxa that were associated with limpet age or the extent of erosion. The results revealed that, when examined at a high taxonomic resolution, cyanobacterial community succession is more complex than previously thought, and may be site-specific. However, the trends observed indicate that cyanobacterial community succession occurs on calcifying organisms <em>in vivo</em>, with a shift towards a climax community after 1.4–2.7 years for <em>P. depressa</em>.</div></div>\",\"PeriodicalId\":50197,\"journal\":{\"name\":\"Journal of Experimental Marine Biology and Ecology\",\"volume\":\"587 \",\"pages\":\"Article 152103\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2025-04-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Experimental Marine Biology and Ecology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022098125000231\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Experimental Marine Biology and Ecology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022098125000231","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ECOLOGY","Score":null,"Total":0}
A DNA-based investigation of endolithic community succession on shells of the limpet Patella depressa Pennant 1777
Biotic and abiotic calcium carbonate structures are used as a substrate by bioeroding organisms, or euendoliths, worldwide. Euendoliths can have serious ecological effects on living hosts, and with global increases in ocean acidification and warming, the efficiency of erosion by marine euendoliths is likely to increase. Here, we used growth curve data for the limpet Patella depressa and 16S rRNA sequencing to explore succession in the endolithic community on the shells of P. depressa throughout its range across Great Britain. Limpet age correlated well with the extent of erosion within sites, but differed among sites, with those at the centre of the host range showing greater erosion when corrected for age. Alpha-diversity and richness of cyanobacteria decreased with the extent of erosion, particularly during the earlier stages of erosion. A decrease in the accumulation rate of Amplicon Sequence Variants (ASVs) occurred at around 80 % of cumulative ASVs, at a shell age of between 1.4 and 2.7 years. Cyanobacterial community composition differed among the shells from the different sites, but despite these differences, there were no discernable patterns in the abundance of specific taxa that were associated with limpet age or the extent of erosion. The results revealed that, when examined at a high taxonomic resolution, cyanobacterial community succession is more complex than previously thought, and may be site-specific. However, the trends observed indicate that cyanobacterial community succession occurs on calcifying organisms in vivo, with a shift towards a climax community after 1.4–2.7 years for P. depressa.
期刊介绍:
The Journal of Experimental Marine Biology and Ecology provides a forum for experimental ecological research on marine organisms in relation to their environment. Topic areas include studies that focus on biochemistry, physiology, behavior, genetics, and ecological theory. The main emphasis of the Journal lies in hypothesis driven experimental work, both from the laboratory and the field. Natural experiments or descriptive studies that elucidate fundamental ecological processes are welcome. Submissions should have a broad ecological framework beyond the specific study organism or geographic region.
Short communications that highlight emerging issues and exciting discoveries within five printed pages will receive a rapid turnaround. Papers describing important new analytical, computational, experimental and theoretical techniques and methods are encouraged and will be highlighted as Methodological Advances. We welcome proposals for Review Papers synthesizing a specific field within marine ecology. Finally, the journal aims to publish Special Issues at regular intervals synthesizing a particular field of marine science. All printed papers undergo a peer review process before being accepted and will receive a first decision within three months.