结合网络药理学和实验验证,探讨穿心莲内酯抗哮喘的药理机制。

IF 5.1 3区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Qian Yu, LiHong Zhu, XuChun Ding, YaFang Lou
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引用次数: 0

摘要

穿心莲内酯(AG)是穿心莲的主要活性成分之一。墙。已被证明在包括哮喘在内的多种疾病中具有抗炎症的药理作用。但潜在的机制仍不清楚。本研究采用网络药理学、分子对接、实验验证等方法,探讨AG治疗哮喘的分子机制。通过Swiss Target Prediction、DrugBank、STITCH、OMIM、Genecards和TTD数据库筛选ag相关靶点和哮喘相关靶点。通过STRING数据库获得蛋白质-蛋白质相互作用(PPI)网络。使用Cytoscape 3.7.1软件中的“Network Analyzer”插件进行拓扑分析。通过metscape数据库和生物信息学平台进行GO富集和KEGG通路分析。通过Cytoscape 3.7.1软件获取目标通路网络。利用AutoDockTools 1.5.6进行分子对接,评估AG与靶基因的结合亲和力。流式细胞术还验证了网络药理学预测的AG治疗哮喘的机制。总共有38个靶点被确定为AG抗哮喘的潜在靶点。PPI显示的前10个靶点是:IL-6、IL-1B、NFKB1、MMP9、CDK2、CREBBP、MAP2K1、JAK1、AR、PRKCA。GO和KEGG分析显示AG对哮喘的治疗主要涉及蛋白磷酸化、肽基丝氨酸磷酸化、肽基氨基酸修饰等生物学过程。主要信号通路有Th17细胞分化、JAK-STAT信号通路和PI3K-Akt信号通路。分子对接表明AG与MMP9、PRKCA、JAK2、LTGAL和LRRK2具有较高的亲和力。流式细胞术显示,Th17细胞分化可能是AG治疗哮喘的潜在靶点。本研究成功揭示了AG治疗哮喘的潜在靶基因和机制,为今后的机制研究提供了参考和指导。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Integration of network pharmacology and experimental validation to explore the pharmacological mechanism of andrographolide against asthma.

Integration of network pharmacology and experimental validation to explore the pharmacological mechanism of andrographolide against asthma.

Integration of network pharmacology and experimental validation to explore the pharmacological mechanism of andrographolide against asthma.

Integration of network pharmacology and experimental validation to explore the pharmacological mechanism of andrographolide against asthma.

Andrographolide (AG), one of the main active components of Andrographis paniculata (Burm.f.) Wall. ex Nees, has been proved to possess the pharmacological function of anti-inflammation in multiple disease including asthma. But the potential mechanism is still not clear. In this study, network pharmacology, molecular docking and experimental validation were utilized to explore the molecular mechanism of AG in the treatment of asthma. AG-related targets and asthma-related targets were screened by Swiss Target Prediction, DrugBank, STITCH, OMIM, Genecards and TTD databases. A protein-protein interaction (PPI) network was obtained through the STRING Database. The plug-in of "Network Analyzer" in Cytoscape 3.7.1 software was used to conduct the topological analysis. GO enrichment and KEGG pathway analysis were achieved by Metascape database and Bioinformatics platform. The target-pathway network was acquired by Cytoscape 3.7.1 software. The binding affinity between AG and the target genes was evaluated by Molecular docking with AutoDockTools 1.5.6. Flow cytometry was also used to verify the mechanism behind the treatment of asthma by AG, which was predicted in network pharmacology. In total, 38 targets were identified as potential targets of AG against asthma. The top 10 targets revealed by PPI are: IL-6, IL-1B, NFKB1, MMP9, CDK2, CREBBP, MAP2K1, JAK1, AR, PRKCA. GO and KEGG analysis showed that AG treatment of asthma mainly involved protein phosphorylation, peptidyl-serine phosphorylation, peptidyl-amino acid modification and other biological processes. The main signaling pathways are Th17 cell differentiation, JAK-STAT signaling pathway and PI3K-Akt signaling pathway. Molecular docking showed that AG has higher affinity with MMP9, PRKCA, JAK2, LTGAL and LRRK2. Flow cytometry showed that Th17 cell differentiation may be the potential target of AG in the treatment of asthma. This study successfully revealed the underlying target genes and mechanism involved in the treatment of asthma for AG, providing a reference and guidance for future mechanism research.

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来源期刊
Bioresources and Bioprocessing
Bioresources and Bioprocessing BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
7.20
自引率
8.70%
发文量
118
审稿时长
13 weeks
期刊介绍: Bioresources and Bioprocessing (BIOB) is a peer-reviewed open access journal published under the brand SpringerOpen. BIOB aims at providing an international academic platform for exchanging views on and promoting research to support bioresource development, processing and utilization in a sustainable manner. As an application-oriented research journal, BIOB covers not only the application and management of bioresource technology but also the design and development of bioprocesses that will lead to new and sustainable production processes. BIOB publishes original and review articles on most topics relating to bioresource and bioprocess engineering, including: -Biochemical and microbiological engineering -Biocatalysis and biotransformation -Biosynthesis and metabolic engineering -Bioprocess and biosystems engineering -Bioenergy and biorefinery -Cell culture and biomedical engineering -Food, agricultural and marine biotechnology -Bioseparation and biopurification engineering -Bioremediation and environmental biotechnology
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