Alvaro Ridruejo , Luis F. Pacios , Joseph Arguelles , Cheryl Y. Hayashi , Manuel Elices , Gustavo V. Guinea , José Pérez-Rigueiro
{"title":"家蚕丝蛋白(GAGAGS)在串联基序中的弹性行为","authors":"Alvaro Ridruejo , Luis F. Pacios , Joseph Arguelles , Cheryl Y. Hayashi , Manuel Elices , Gustavo V. Guinea , José Pérez-Rigueiro","doi":"10.1016/j.jmbbm.2025.107002","DOIUrl":null,"url":null,"abstract":"<div><div>The mechanical properties of tandems composed by a repetition of the –GAGAGS– motif characteristic of <em>Bombyx mori</em> silk fibroin are explored using molecular dynamics simulations. For each tandem the calculation starts from the configuration reached upon minimizing the initial energy and proceeds by determining representative stationary states obtained from molecular dynamics simulations at a temperature of T = 300 K. Subsequently, the tandems are loaded by applying force to the α-carbon atoms at their ends and the force-displacement curve is built from the force exerted on the tandem as a function of the end–to–end distance between these atoms. The results obtained reveal two regimes as a function of the number of repetitions: tandems with one or two repetitions do not show a characteristic elastomeric behavior, while the curves calculated for tandems with a number of repetitions of three or greater can be fitted to the theoretical curves of a freely jointed chain.</div></div>","PeriodicalId":380,"journal":{"name":"Journal of the Mechanical Behavior of Biomedical Materials","volume":"168 ","pages":"Article 107002"},"PeriodicalIF":3.3000,"publicationDate":"2025-04-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Elastomeric behavior of the Bombyx mori fibroin (GAGAGS)n tandem motifs\",\"authors\":\"Alvaro Ridruejo , Luis F. Pacios , Joseph Arguelles , Cheryl Y. Hayashi , Manuel Elices , Gustavo V. Guinea , José Pérez-Rigueiro\",\"doi\":\"10.1016/j.jmbbm.2025.107002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>The mechanical properties of tandems composed by a repetition of the –GAGAGS– motif characteristic of <em>Bombyx mori</em> silk fibroin are explored using molecular dynamics simulations. For each tandem the calculation starts from the configuration reached upon minimizing the initial energy and proceeds by determining representative stationary states obtained from molecular dynamics simulations at a temperature of T = 300 K. Subsequently, the tandems are loaded by applying force to the α-carbon atoms at their ends and the force-displacement curve is built from the force exerted on the tandem as a function of the end–to–end distance between these atoms. The results obtained reveal two regimes as a function of the number of repetitions: tandems with one or two repetitions do not show a characteristic elastomeric behavior, while the curves calculated for tandems with a number of repetitions of three or greater can be fitted to the theoretical curves of a freely jointed chain.</div></div>\",\"PeriodicalId\":380,\"journal\":{\"name\":\"Journal of the Mechanical Behavior of Biomedical Materials\",\"volume\":\"168 \",\"pages\":\"Article 107002\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2025-04-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of the Mechanical Behavior of Biomedical Materials\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1751616125001183\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the Mechanical Behavior of Biomedical Materials","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1751616125001183","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Elastomeric behavior of the Bombyx mori fibroin (GAGAGS)n tandem motifs
The mechanical properties of tandems composed by a repetition of the –GAGAGS– motif characteristic of Bombyx mori silk fibroin are explored using molecular dynamics simulations. For each tandem the calculation starts from the configuration reached upon minimizing the initial energy and proceeds by determining representative stationary states obtained from molecular dynamics simulations at a temperature of T = 300 K. Subsequently, the tandems are loaded by applying force to the α-carbon atoms at their ends and the force-displacement curve is built from the force exerted on the tandem as a function of the end–to–end distance between these atoms. The results obtained reveal two regimes as a function of the number of repetitions: tandems with one or two repetitions do not show a characteristic elastomeric behavior, while the curves calculated for tandems with a number of repetitions of three or greater can be fitted to the theoretical curves of a freely jointed chain.
期刊介绍:
The Journal of the Mechanical Behavior of Biomedical Materials is concerned with the mechanical deformation, damage and failure under applied forces, of biological material (at the tissue, cellular and molecular levels) and of biomaterials, i.e. those materials which are designed to mimic or replace biological materials.
The primary focus of the journal is the synthesis of materials science, biology, and medical and dental science. Reports of fundamental scientific investigations are welcome, as are articles concerned with the practical application of materials in medical devices. Both experimental and theoretical work is of interest; theoretical papers will normally include comparison of predictions with experimental data, though we recognize that this may not always be appropriate. The journal also publishes technical notes concerned with emerging experimental or theoretical techniques, letters to the editor and, by invitation, review articles and papers describing existing techniques for the benefit of an interdisciplinary readership.